Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT85790.1 | APT86230.1 | CFLV_00215 | CFLV_02830 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | 0.544 |
| APT85790.1 | APT87195.1 | CFLV_00215 | CFLV_08290 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.940 |
| APT85790.1 | dacB | CFLV_00215 | CFLV_11145 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.594 |
| APT85790.1 | ddl | CFLV_00215 | CFLV_05630 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.425 |
| APT85790.1 | mraY | CFLV_00215 | CFLV_08275 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.539 |
| APT85790.1 | murA | CFLV_00215 | CFLV_10510 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.415 |
| APT85790.1 | murB | CFLV_00215 | CFLV_01685 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.410 |
| APT85790.1 | murC | CFLV_00215 | CFLV_08255 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.640 |
| APT85790.1 | murD | CFLV_00215 | CFLV_08270 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.496 |
| APT85790.1 | murE | CFLV_00215 | CFLV_08285 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.519 |
| APT85790.1 | murF | CFLV_00215 | CFLV_08280 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.569 |
| APT85956.1 | murE | CFLV_01230 | CFLV_08285 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.871 |
| APT86230.1 | APT85790.1 | CFLV_02830 | CFLV_00215 | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| APT86230.1 | APT87195.1 | CFLV_02830 | CFLV_08290 | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |
| APT86230.1 | dacB | CFLV_02830 | CFLV_11145 | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| APT87195.1 | APT85790.1 | CFLV_08290 | CFLV_00215 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.940 |
| APT87195.1 | APT86230.1 | CFLV_08290 | CFLV_02830 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | 0.498 |
| APT87195.1 | ddl | CFLV_08290 | CFLV_05630 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.574 |
| APT87195.1 | mraY | CFLV_08290 | CFLV_08275 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.864 |
| APT87195.1 | murA | CFLV_08290 | CFLV_10510 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.723 |
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