STRINGSTRING
dnaA dnaA APT85840.1 APT85840.1 APT85859.1 APT85859.1 APT85860.1 APT85860.1 APT85978.1 APT85978.1 APT86037.1 APT86037.1 APT86038.1 APT86038.1 APT86281.1 APT86281.1 APT86337.1 APT86337.1 APT86425.1 APT86425.1 APT86458.1 APT86458.1 APT86459.1 APT86459.1 APT86635.1 APT86635.1 APT86646.1 APT86646.1 APT86799.1 APT86799.1 APT86891.1 APT86891.1 glnD glnD APT87112.1 APT87112.1 glnA glnA glnA-2 glnA-2 APT87250.1 APT87250.1 APT87262.1 APT87262.1 APT87275.1 APT87275.1 APT87276.1 APT87276.1 APT87277.1 APT87277.1 cydB cydB pstS pstS APT87583.1 APT87583.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaAChromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (542 aa)
APT85840.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
APT85859.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
APT85860.1Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
APT85978.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
APT86037.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
APT86038.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
APT86281.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (385 aa)
APT86337.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
APT86425.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
APT86458.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
APT86459.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
APT86635.1Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (473 aa)
APT86646.1lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa)
APT86799.1Functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
APT86891.1Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
glnDprotein-PII uridylyltransferase; Uridylylates and de-uridylylates the small trimeric protein Pii; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GlnD family. (710 aa)
APT87112.1Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
glnAGlutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
glnA-2Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
APT87250.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (445 aa)
APT87262.1Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (154 aa)
APT87275.1Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (316 aa)
APT87276.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
APT87277.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
cydBCytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
pstSPhosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (366 aa)
APT87583.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (423 aa)
Your Current Organism:
Corynebacterium flavescens
NCBI taxonomy Id: 28028
Other names: ATCC 10340, C. flavescens, CCUG 28791, CIP 69.5, DSM 20296, IFO 14136, LMG 4046, LMG:4046, Microbacterium flavum , Mycobacterium flavum, NBRC 14136, NCCB 42012, NCIB 8707, NCIB:8707, NCIMB 8707
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