(11 nodes) Tryptophan metabolism network (Staphylococcus lugdunensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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Your Input:
	ARJ28604.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
	ARJ28809.1	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (384 aa)
	ARJ28839.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (497 aa)
	lpdA	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	ARJ29236.1	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
	ARJ29352.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (459 aa)
	ARJ29686.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
	ARJ29792.1	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	ARJ29848.1	Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (501 aa)
	ARJ29943.1	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (381 aa)
	ARJ30051.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)

Your Current Organism:

Staphylococcus lugdunensis

NCBI taxonomy Id: 28035
Other names: ATCC 43809, CCUG 25348, CIP 103642, DSM 4804, LMG 13346, LMG:13346, NCTC 12217, NRRL B-14774, S. lugdunensis, strain N860297

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARJ28604.1	ARJ29686.1	B6N84_00940	B6N84_06730	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
ARJ28604.1	ARJ29792.1	B6N84_00940	B6N84_07275	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ARJ28604.1	ARJ30051.1	B6N84_00940	B6N84_08630	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
ARJ28604.1	lpdA	B6N84_00940	B6N84_02340	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ARJ28809.1	ARJ29792.1	B6N84_02005	B6N84_07275	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
ARJ28809.1	ARJ29943.1	B6N84_02005	B6N84_08070	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.915
ARJ28839.1	ARJ29236.1	B6N84_02165	B6N84_04255	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
ARJ28839.1	ARJ29352.1	B6N84_02165	B6N84_04860	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.923
ARJ29236.1	ARJ28839.1	B6N84_04255	B6N84_02165	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.913
ARJ29236.1	ARJ29352.1	B6N84_04255	B6N84_04860	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.923
ARJ29352.1	ARJ28839.1	B6N84_04860	B6N84_02165	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.923
ARJ29352.1	ARJ29236.1	B6N84_04860	B6N84_04255	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ARJ29686.1	ARJ28604.1	B6N84_06730	B6N84_00940	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
ARJ29686.1	ARJ29792.1	B6N84_06730	B6N84_07275	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
ARJ29686.1	ARJ30051.1	B6N84_06730	B6N84_08630	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
ARJ29686.1	lpdA	B6N84_06730	B6N84_02340	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
ARJ29792.1	ARJ28604.1	B6N84_07275	B6N84_00940	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ARJ29792.1	ARJ28809.1	B6N84_07275	B6N84_02005	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.821
ARJ29792.1	ARJ29686.1	B6N84_07275	B6N84_06730	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
ARJ29792.1	ARJ29943.1	B6N84_07275	B6N84_08070	Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.821

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