STRINGSTRING
CYME_CMD030C CYME_CMD030C CYME_CME151C CYME_CME151C CYME_CMO190C CYME_CMO190C CYME_CMP349C CYME_CMP349C CYME_CMS476C CYME_CMS476C EIF6 EIF6 CYME_CMJ252C CYME_CMJ252C CYME_CML272C CYME_CML272C CYME_CMM200C CYME_CMM200C CYME_CMP117C CYME_CMP117C CYME_CMC134C CYME_CMC134C CYME_CMS390C CYME_CMS390C CYME_CMT105C CYME_CMT105C CYME_CMT160C CYME_CMT160C CYME_CMI122C CYME_CMI122C CYME_CMN108C CYME_CMN108C CYME_CMO236C CYME_CMO236C CYME_CMT023C CYME_CMT023C CYME_CMT043C CYME_CMT043C CYME_CMT080C CYME_CMT080C CYME_CMT130C CYME_CMT130C CYME_CMT194C CYME_CMT194C CYME_CMT341C CYME_CMT341C CYME_CML111C CYME_CML111C CYME_CMB048C CYME_CMB048C CYME_CMB146C CYME_CMB146C CYME_CMQ057C CYME_CMQ057C CYME_CMQ177C CYME_CMQ177C CYME_CMQ345C CYME_CMQ345C CYME_CMS416C CYME_CMS416C CYME_CML268C CYME_CML268C CYME_CMO200C CYME_CMO200C CYME_CMR049C CYME_CMR049C
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CYME_CMD030CUncharacterized protein. (257 aa)
CYME_CME151CGTP-binding protein of Nug1 family. (434 aa)
CYME_CMO190CProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (803 aa)
CYME_CMP349CSimilar to RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (626 aa)
CYME_CMS476CRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (260 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (248 aa)
CYME_CMJ252CProbable rRNA methyltransferase pmt2. (848 aa)
CYME_CML272CBrix domain-containing protein. (297 aa)
CYME_CMM200CProbable DNA binding protein. (444 aa)
CYME_CMP117CBlock of proliferation 1. (684 aa)
CYME_CMC134CProbable constituent of 66S pre-ribosomal particles Nsa2p. (264 aa)
CYME_CMS390CProbable essential nucleolar protein required for biogenesis of the 60S ribosomal subunit Brx1p. (301 aa)
CYME_CMT105CPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (653 aa)
CYME_CMT160C60S ribosomal protein L24 homolog. (200 aa)
CYME_CMI122CSimilar to RNA-binding protein with RRM. (168 aa)
CYME_CMN108C60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
CYME_CMO236CUncharacterized protein. (340 aa)
CYME_CMT023CSimilar to nucleolar-matrix protein with nucleic-acid binding properties, subunit 6. (276 aa)
CYME_CMT043CGTP-binding protein of Nug1 family. (548 aa)
CYME_CMT080CUncharacterized protein. (344 aa)
CYME_CMT130CNucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (752 aa)
CYME_CMT194C60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (580 aa)
CYME_CMT341CProtein MAK16 homolog; Belongs to the MAK16 family. (348 aa)
CYME_CML111CC2H2-type domain-containing protein. (102 aa)
CYME_CMB048C60S acidic ribosomal protein PO. (235 aa)
CYME_CMB146CNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (650 aa)
CYME_CMQ057CBrix domain-containing protein. (331 aa)
CYME_CMQ177CSimilar to ribosome biogenesis protein SSF1. (351 aa)
CYME_CMQ345CGTP-binding protein of Nug1 family. (591 aa)
CYME_CMS416CRNA helicase. (715 aa)
CYME_CML268CPUM-HD domain-containing protein. (552 aa)
CYME_CMO200CSimilar to nucleolar ribosome transport complex component Noc2p. (757 aa)
CYME_CMR049CSimilar to nucleolar complex Nop3. (871 aa)
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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