STRINGSTRING
CYME_CMT424C CYME_CMT424C CYME_CMA072C CYME_CMA072C CYME_CMC036C CYME_CMC036C CYME_CMD016C CYME_CMD016C CYME_CMD024C CYME_CMD024C CYME_CMD030C CYME_CMD030C CYME_CMG105C CYME_CMG105C CYME_CMG157C CYME_CMG157C CYME_CMH065C CYME_CMH065C CYME_CMH241C CYME_CMH241C CYME_CMI018C CYME_CMI018C CYME_CMI058C CYME_CMI058C CYME_CMI232C CYME_CMI232C CYME_CMJ161C CYME_CMJ161C CYME_CML304C CYME_CML304C CYME_CML317C CYME_CML317C CYME_CMM228C CYME_CMM228C CYME_CMN201C CYME_CMN201C CYME_CMO190C CYME_CMO190C CYME_CMO203C CYME_CMO203C CYME_CMS138C CYME_CMS138C CYME_CMS468C CYME_CMS468C CYME_CMS476C CYME_CMS476C CYME_CMS485C CYME_CMS485C CYME_CMT114C CYME_CMT114C CYME_CMT202C CYME_CMT202C CYME_CMT343C CYME_CMT343C EIF6 EIF6 CYME_CMT376C CYME_CMT376C CYME_CMB019C CYME_CMB019C CYME_CMC024C CYME_CMC024C CYME_CMC053C CYME_CMC053C CYME_CME165C CYME_CME165C CYME_CMF059C CYME_CMF059C CYME_CMG184C CYME_CMG184C CYME_CMH198C CYME_CMH198C CYME_CMH261C CYME_CMH261C CYME_CMI017C CYME_CMI017C CYME_CMI098C CYME_CMI098C CYME_CMJ252C CYME_CMJ252C CYME_CMK156C CYME_CMK156C CYME_CMK273C CYME_CMK273C CYME_CML272C CYME_CML272C CYME_CML336C CYME_CML336C CYME_CMN180C CYME_CMN180C CYME_CMO008C CYME_CMO008C CYME_CMP042C CYME_CMP042C CYME_CMP117C CYME_CMP117C CYME_CMQ185C CYME_CMQ185C CYME_CMA122C CYME_CMA122C CYME_CMC010C CYME_CMC010C CYME_CMC111C CYME_CMC111C CYME_CMQ445C CYME_CMQ445C CYME_CMC134C CYME_CMC134C CYME_CMR372C CYME_CMR372C CYME_CME044C CYME_CME044C CYME_CMR456C CYME_CMR456C CYME_CMS030C CYME_CMS030C CYME_CMS060C CYME_CMS060C CYME_CMS124C CYME_CMS124C CYME_CMF157C CYME_CMF157C CYME_CMS219C CYME_CMS219C CYME_CMG096C CYME_CMG096C CYME_CMG109C CYME_CMG109C CYME_CMS390C CYME_CMS390C CYME_CMH071C CYME_CMH071C CYME_CMT105C CYME_CMT105C CYME_CMT131C CYME_CMT131C CYME_CMH131C CYME_CMH131C CYME_CMT160C CYME_CMT160C CYME_CMT211C CYME_CMT211C CYME_CMH278C CYME_CMH278C CYME_CMI122C CYME_CMI122C CYME_CMI184C CYME_CMI184C CYME_CMT432C CYME_CMT432C CYME_CMT518C CYME_CMT518C CYME_CMJ109C CYME_CMJ109C CYME_CMK083C CYME_CMK083C CYME_CML137C CYME_CML137C CYME_CMM180C CYME_CMM180C CYME_CMN108C CYME_CMN108C CYME_CMN132C CYME_CMN132C CYME_CMN167C CYME_CMN167C CYME_CMO109C CYME_CMO109C CYME_CMO193C CYME_CMO193C CYME_CMO206C CYME_CMO206C CYME_CMO236C CYME_CMO236C CYME_CMO310C CYME_CMO310C CYME_CMP010C CYME_CMP010C CYME_CMA015C CYME_CMA015C CYME_CMB073C CYME_CMB073C CYME_CMC063C CYME_CMC063C CYME_CMQ078C CYME_CMQ078C CYME_CMQ144C CYME_CMQ144C CYME_CMQ331C CYME_CMQ331C CYME_CMR199C CYME_CMR199C CYME_CMR280C CYME_CMR280C CYME_CMR371C CYME_CMR371C CYME_CMS053C CYME_CMS053C CYME_CMT023C CYME_CMT023C CYME_CMT080C CYME_CMT080C CYME_CMT130C CYME_CMT130C CYME_CMT188C CYME_CMT188C CYME_CMT194C CYME_CMT194C CYME_CMJ120C CYME_CMJ120C CYME_CMT215C CYME_CMT215C CYME_CMJ306C CYME_CMJ306C CYME_CMT341C CYME_CMT341C CYME_CMT390C CYME_CMT390C CYME_CMT410C CYME_CMT410C CYME_CMT485C CYME_CMT485C CYME_CMT635C CYME_CMT635C CYME_CML046C CYME_CML046C CYME_CML198C CYME_CML198C CYME_CMM329C CYME_CMM329C CYME_CMN074C CYME_CMN074C CYME_CMB048C CYME_CMB048C CYME_CMB146C CYME_CMB146C CYME_CMO107C CYME_CMO107C CYME_CMO240C CYME_CMO240C CYME_CMP007C CYME_CMP007C CYME_CMP138C CYME_CMP138C CYME_CMP203C CYME_CMP203C CYME_CMP222C CYME_CMP222C CYME_CMF079C CYME_CMF079C CYME_CMP335C CYME_CMP335C CYME_CMF177C CYME_CMF177C CYME_CMQ057C CYME_CMQ057C CYME_CMG027C CYME_CMG027C CYME_CMG167C CYME_CMG167C CYME_CMH057C CYME_CMH057C CYME_CMR148C CYME_CMR148C CYME_CMI132C CYME_CMI132C CYME_CMR267C CYME_CMR267C CYME_CMR495C CYME_CMR495C CYME_CMJ206C CYME_CMJ206C CYME_CMK102C CYME_CMK102C CYME_CMK256C CYME_CMK256C CYME_CMM143C CYME_CMM143C CYME_CMT627C CYME_CMT627C CYME_CMO023C CYME_CMO023C CYME_CMO036C CYME_CMO036C CYME_CMO200C CYME_CMO200C CYME_CMP003C CYME_CMP003C CYME_CMQ035C CYME_CMQ035C CYME_CMQ051C CYME_CMQ051C CYME_CMQ071C CYME_CMQ071C CYME_CMQ382C CYME_CMQ382C CYME_CMR129C CYME_CMR129C CYME_CMR402C CYME_CMR402C CYME_CMS417C CYME_CMS417C CYME_CMT453C CYME_CMT453C CYME_CMT605C CYME_CMT605C CYME_CMT634C CYME_CMT634C rpl20 rpl20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CYME_CMT424CUncharacterized protein. (846 aa)
CYME_CMA072CProbable nuclear exosomal RNA helicase MTR4. (1046 aa)
CYME_CMC036CSimilar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (547 aa)
CYME_CMD016CProbable ribosome biogenesis protein CYME_CMD016C; Probable pre-rRNA processing protein involved in ribosome biogenesis. (222 aa)
CYME_CMD024CRibosomal large subunit pseudouridine synthase A. (416 aa)
CYME_CMD030CUncharacterized protein. (257 aa)
CYME_CMG105CProbable WD-repeat membrane protein. (970 aa)
CYME_CMG157C60S ribosomal protein L26. (143 aa)
CYME_CMH065C60S ribosomal protein L14. (140 aa)
CYME_CMH241CUncharacterized protein. (559 aa)
CYME_CMI018CSimilar to U3 snoRNP component Utp14p. (1007 aa)
CYME_CMI058CATP-binding cassette, sub-family E, member 1. (677 aa)
CYME_CMI232CUncharacterized protein. (174 aa)
CYME_CMJ161CUncharacterized protein. (148 aa)
CYME_CML304C60S ribosomal protein L35A. (113 aa)
CYME_CML317C60S ribosomal protein L7A. (248 aa)
CYME_CMM228CUncharacterized protein. (399 aa)
CYME_CMN201CGTP-binding protein of Era family. (383 aa)
CYME_CMO190CProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (803 aa)
CYME_CMO203CUncharacterized protein. (928 aa)
CYME_CMS138CNUC153 domain-containing protein. (609 aa)
CYME_CMS468CSimilar to DRAP deaminase involved in riboflavin biosynthesis. (951 aa)
CYME_CMS476CRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (260 aa)
CYME_CMS485CNop domain-containing protein. (364 aa)
CYME_CMT114CSimilar to ribonuclease PH. (294 aa)
CYME_CMT202CUncharacterized protein. (325 aa)
CYME_CMT343CUncharacterized protein. (312 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (248 aa)
CYME_CMT376CExosome complex exonuclease Rrp4. (305 aa)
CYME_CMB019CSimilar to U3 snoRNP component Mpp10. (953 aa)
CYME_CMC024CRibosomal large subunit pseudouridine synthase D. (551 aa)
CYME_CMC053C60S ribosomal protein L35. (132 aa)
CYME_CME165CrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (357 aa)
CYME_CMF059CUncharacterized protein. (204 aa)
CYME_CMG184CSimilar to U3 snoRNP component Utp6p. (317 aa)
CYME_CMH198CBox H/ACA snoRNP component Nop10p. (64 aa)
CYME_CMH261CSimilar to ribose methyltransferase. (457 aa)
CYME_CMI017CSimilar to exosome complex exonuclease RRP40. (270 aa)
CYME_CMI098CSimilar to eukaryotic translation elongation factor 2. (1266 aa)
CYME_CMJ252CProbable rRNA methyltransferase pmt2. (848 aa)
CYME_CMK156CSimilar to rRNA methylase SpoU. (309 aa)
CYME_CMK273C60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family. (146 aa)
CYME_CML272CBrix domain-containing protein. (297 aa)
CYME_CML336CSimilar to RNA helicase. (552 aa)
CYME_CMN180CSimilar to methyl transferase. (224 aa)
CYME_CMO008CRibonuclease P protein subunit POP5. (194 aa)
CYME_CMP042CSimilar to U3 snoRNP component Utp13p. (1216 aa)
CYME_CMP117CBlock of proliferation 1. (684 aa)
CYME_CMQ185CBox C/D snoRNP component Nop56. (554 aa)
CYME_CMA122C40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
CYME_CMC010CSimilar to U3 snoRNP component Imp3p. (174 aa)
CYME_CMC111CTranscription-repair coupling factor. (917 aa)
CYME_CMQ445C60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (323 aa)
CYME_CMC134CProbable constituent of 66S pre-ribosomal particles Nsa2p. (264 aa)
CYME_CMR372CUncharacterized protein. (357 aa)
CYME_CME044CUncharacterized protein. (1115 aa)
CYME_CMR456CKRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (351 aa)
CYME_CMS030CUncharacterized protein. (335 aa)
CYME_CMS060CBms1-type G domain-containing protein. (1205 aa)
CYME_CMS124CValosin-containing protein. (720 aa)
CYME_CMF157CProbable U3 snoRNP component Utp7p. (645 aa)
CYME_CMS219CSimilar to dsRNA-specific ribonuclease. (642 aa)
CYME_CMG096CRibonuclease P protein subunit POP4. (282 aa)
CYME_CMG109C40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (148 aa)
CYME_CMS390CProbable essential nucleolar protein required for biogenesis of the 60S ribosomal subunit Brx1p. (301 aa)
CYME_CMH071C60S ribosomal protein L5. (298 aa)
CYME_CMT105CPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (653 aa)
CYME_CMT131CProbable RNA helicase with DEAD box; Belongs to the DEAD box helicase family. (680 aa)
CYME_CMH131CSimilar to basal transcription factor ABT1. (278 aa)
CYME_CMT160C60S ribosomal protein L24 homolog. (200 aa)
CYME_CMT211CU3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (241 aa)
CYME_CMH278CRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1079 aa)
CYME_CMI122CSimilar to RNA-binding protein with RRM. (168 aa)
CYME_CMI184CH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (196 aa)
CYME_CMT432CSimilar to charged amino acid rich leucine zipper factor-1. (796 aa)
CYME_CMT518CSimilar to tetrapyrrole methylase. (481 aa)
CYME_CMJ109C60S ribosomal protein L10. (214 aa)
CYME_CMK083CDEAD box protein; Belongs to the DEAD box helicase family. (453 aa)
CYME_CML137CATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (592 aa)
CYME_CMM180CCLP1_P domain-containing protein. (541 aa)
CYME_CMN108C60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
CYME_CMN132CRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (187 aa)
CYME_CMN167CRIO-like serine/threonine protein kinase. (509 aa)
CYME_CMO109CPre-rRNA processing protein bystin. (490 aa)
CYME_CMO193CUncharacterized protein. (2126 aa)
CYME_CMO206CSimilar to ribosomal RNA processing exonuclease RRP41. (313 aa)
CYME_CMO236CUncharacterized protein. (340 aa)
CYME_CMO310C60S ribosomal protein L7. (244 aa)
CYME_CMP010CUtp12 domain-containing protein. (1052 aa)
CYME_CMA015CUncharacterized protein. (915 aa)
CYME_CMB073CSimilar to ribosome assembly protein RRB1. (475 aa)
CYME_CMC063CProbable ribosome biogenesis protein NEP1. (234 aa)
CYME_CMQ078C60S ribosomal protein L6. (231 aa)
CYME_CMQ144CMI domain-containing protein. (588 aa)
CYME_CMQ331CSimilar to DEAH-box RNA helicase Dhr1. (1507 aa)
CYME_CMR199CSimilar to transitional endoplasmic reticulum ATPase. (648 aa)
CYME_CMR280CHIT-type domain-containing protein. (317 aa)
CYME_CMR371CSimilar to rRNA processing protein 7. (450 aa)
CYME_CMS053CUncharacterized protein. (533 aa)
CYME_CMT023CSimilar to nucleolar-matrix protein with nucleic-acid binding properties, subunit 6. (276 aa)
CYME_CMT080CUncharacterized protein. (344 aa)
CYME_CMT130CNucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (752 aa)
CYME_CMT188CSimilar to KRR1-interacting protein. (646 aa)
CYME_CMT194C60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (580 aa)
CYME_CMJ120CPutative nin one binding protein. (509 aa)
CYME_CMT215CWD_REPEATS_REGION domain-containing protein. (509 aa)
CYME_CMJ306CSimilar to ribonuclease PH. (482 aa)
CYME_CMT341CProtein MAK16 homolog; Belongs to the MAK16 family. (348 aa)
CYME_CMT390CPseudoU_synth_2 domain-containing protein. (409 aa)
CYME_CMT410C40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (298 aa)
CYME_CMT485CMitochondrial ribosomal protein S7. (144 aa)
CYME_CMT635CRNase_PH domain-containing protein. (324 aa)
CYME_CML046CPINc domain-containing protein. (196 aa)
CYME_CML198CRibosomal large subunit pseudouridine synthase C. (447 aa)
CYME_CMM329CRNA helicase. (969 aa)
CYME_CMN074CBox C/D snoRNP rRNA methylase component fibrillarin. (356 aa)
CYME_CMB048C60S acidic ribosomal protein PO. (235 aa)
CYME_CMB146CNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (650 aa)
CYME_CMO107CATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (854 aa)
CYME_CMO240CUncharacterized protein. (255 aa)
CYME_CMP007C40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (141 aa)
CYME_CMP138CU6 snRNA-associated Sm-like protein LSm6. (99 aa)
CYME_CMP203CCBF domain-containing protein. (624 aa)
CYME_CMP222CProbable ATP-dependent RNA helicase ROK1; Belongs to the DEAD box helicase family. (547 aa)
CYME_CMF079CRibosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (307 aa)
CYME_CMP335CRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (145 aa)
CYME_CMF177CSimilar to polymyositis-scleroderma overlap syndrome associated autoantigen. (492 aa)
CYME_CMQ057CBrix domain-containing protein. (331 aa)
CYME_CMG027CUncharacterized protein. (278 aa)
CYME_CMG167CCell cycle controlling protein kinase RIO. (649 aa)
CYME_CMH057CUncharacterized protein. (727 aa)
CYME_CMR148C40S ribosomal protein S19. (151 aa)
CYME_CMI132CU3 snoRNP component Sof1p. (442 aa)
CYME_CMR267CSimilar to U3 snoRNP-associated 55-kDa protein RRP9. (601 aa)
CYME_CMR495CUncharacterized protein. (388 aa)
CYME_CMJ206CUncharacterized protein. (592 aa)
CYME_CMK102CUncharacterized protein. (304 aa)
CYME_CMK256CWD_REPEATS_REGION domain-containing protein. (515 aa)
CYME_CMM143CYqgFc domain-containing protein. (222 aa)
CYME_CMT627C40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (197 aa)
CYME_CMO023CSimilar to rRNA biogenesis protein rrp5 homolog multiple S1 rna binding domain protein. (2038 aa)
CYME_CMO036CProbable ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (703 aa)
CYME_CMO200CSimilar to nucleolar ribosome transport complex component Noc2p. (757 aa)
CYME_CMP003CNUC153 domain-containing protein. (513 aa)
CYME_CMQ035CSimilar to exosome complex exonuclease RRP45. (519 aa)
CYME_CMQ051C40S ribosomal protein S21. (104 aa)
CYME_CMQ071CProbable U3 snoRNP component Imp4p. (344 aa)
CYME_CMQ382CSimilar to U3 snoRNP component Utp15p. (543 aa)
CYME_CMR129CrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (360 aa)
CYME_CMR402CPeptidyl-prolyl cis-trans isomerase. (127 aa)
CYME_CMS417CMitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (248 aa)
CYME_CMT453CSimilar to nucleolar RNA-associated protein NRAP. (1050 aa)
CYME_CMT605CBox C/D snoRNP component Nop58. (515 aa)
CYME_CMT634CSimilar to rRNA methylase SpoU. (703 aa)
rpl2050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (116 aa)
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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