STRINGSTRING
CYME_CMS082C CYME_CMS082C CYME_CML129C CYME_CML129C CYME_CMF111C CYME_CMF111C CYME_CMF038C CYME_CMF038C CYME_CMN247C CYME_CMN247C CYME_CMJ102C CYME_CMJ102C CYME_CMR144C CYME_CMR144C CYME_CMH176C CYME_CMH176C CYME_CME016C CYME_CME016C CYME_CMO202C CYME_CMO202C CYME_CMC018C CYME_CMC018C CYME_CML280C CYME_CML280C CYME_CMD102C CYME_CMD102C CYME_CMS324C CYME_CMS324C
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CYME_CMS082CMHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (594 aa)
CYME_CML129CSimilar to v-SNARE protein of ER-Golgi docking complex; Belongs to the synaptobrevin family. (203 aa)
CYME_CMF111CSimilar to putative vesicle transport protein; Belongs to the synaptobrevin family. (237 aa)
CYME_CMF038CSimilar to sedlin. (166 aa)
CYME_CMN247CCoatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (205 aa)
CYME_CMJ102CAdaptor-related protein complex 1, mu subunit; Belongs to the adaptor complexes medium subunit family. (444 aa)
CYME_CMR144CAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (191 aa)
CYME_CMH176CSimilar to synaptobrevin-type protein transport protein; Belongs to the synaptobrevin family. (253 aa)
CYME_CME016CSignal recognition particle receptor alpha subunit. (664 aa)
CYME_CMO202CCoatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (600 aa)
CYME_CMC018CSimilar to vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (274 aa)
CYME_CML280CTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
CYME_CMD102CAP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (217 aa)
CYME_CMS324CTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (176 aa)
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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