STRINGSTRING
Lcin_3014 Lcin_3014 Lcin_0071 Lcin_0071 Lcin_0072 Lcin_0072 Lcin_0081 Lcin_0081 lvrA lvrA Lcin_0152 Lcin_0152 Lcin_0154 Lcin_0154 Lcin_0161 Lcin_0161 Lcin_0164 Lcin_0164 Lcin_0168 Lcin_0168 gcdH gcdH pdhB_1 pdhB_1 Lcin_0224 Lcin_0224 yafP yafP Lcin_0230 Lcin_0230 Lcin_0232 Lcin_0232 Lcin_0256 Lcin_0256 Lcin_0259 Lcin_0259 hspA_2 hspA_2 prpB prpB folK folK lip2 lip2 cpo cpo pilF pilF odpA odpA odpB odpB cptB cptB rpmF rpmF dnaQ dnaQ rnhA rnhA fis_1 fis_1 dnaG_1 dnaG_1 Lcin_0432 Lcin_0432 Lcin_0451 Lcin_0451 tadA_2 tadA_2 Lcin_0480 Lcin_0480 fabG_8 fabG_8 Lcin_0508 Lcin_0508 Lcin_0523 Lcin_0523 pds pds phbC_1 phbC_1 gltB_1 gltB_1 plaB plaB Lcin_0555 Lcin_0555 ychF ychF rplY rplY rplU rplU rpmA rpmA Lcin_0579 Lcin_0579 rpsT rpsT rnz_1 rnz_1 rplQ rplQ rpsD rpsD rpsK rpsK rpsM rpsM rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN rpsN rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rplP rplP rpsC rpsC rplV rplV rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ Lcin_0652 Lcin_0652 plsC plsC fis_2 fis_2 sspB sspB rpsI rpsI rplM rplM himA himA rplT rplT rpmI rpmI ybaB ybaB recR recR rpsO rpsO infB infB nusA nusA hda hda recN_1 recN_1 fni fni Lcin_0816 Lcin_0816 Lcin_0826 Lcin_0826 yciA yciA nth nth priA priA Lcin_0885 Lcin_0885 Lcin_0886 Lcin_0886 Lcin_0896 Lcin_0896 Lcin_0897 Lcin_0897 Lcin_0898 Lcin_0898 parB_1 parB_1 ctaG ctaG hemG hemG himD himD yhhW_1 yhhW_1 Lcin_1024 Lcin_1024 speA speA fmdA fmdA recF recF dnaA dnaA Lcin_1081 Lcin_1081 Lcin_1086 Lcin_1086 Lcin_1087 Lcin_1087 Lcin_1099 Lcin_1099 Lcin_1100 Lcin_1100 Lcin_1108 Lcin_1108 yfcG yfcG phbC_2 phbC_2 Lcin_1161 Lcin_1161 strB1 strB1 Lcin_1195 Lcin_1195 pkn1 pkn1 dnaG_2 dnaG_2 rpsU rpsU ribF ribF recO recO Lcin_1274 Lcin_1274 Lcin_1281 Lcin_1281 rapA rapA dnaB dnaB etfB etfB etfA etfA recQ recQ acdA acdA Lcin_1457 Lcin_1457 traI_3 traI_3 parB_2 parB_2 noc noc Lcin_1523 Lcin_1523 Lcin_1534 Lcin_1534 mvaB mvaB dtd dtd rpsL_1 rpsL_1 rpsL_2 rpsL_2 rplL rplL rplJ rplJ rplA rplA rplK rplK nusG nusG Lcin_1601 Lcin_1601 rplS rplS rpsP rpsP ubiX ubiX Lcin_1669 Lcin_1669 yhhW_2 yhhW_2 yqjG yqjG fadE_1 fadE_1 Lcin_1730 Lcin_1730 Lcin_1741 Lcin_1741 nudC nudC Lcin_1791 Lcin_1791 parB_3 parB_3 fabG_4 fabG_4 Lcin_1858 Lcin_1858 hemA hemA ankH_1 ankH_1 ankH_2 ankH_2 Lcin_1911 Lcin_1911 Lcin_1912 Lcin_1912 Lcin_1918 Lcin_1918 phbC_5 phbC_5 yqgF yqgF smc_2 smc_2 hemH hemH edd edd ypmQ ypmQ ctaA ctaA Lcin_2032 Lcin_2032 Lcin_2033 Lcin_2033 Lcin_2046 Lcin_2046 Lcin_2079 Lcin_2079 pheA_1 pheA_1 DWF DWF Lcin_2182 Lcin_2182 aidB aidB Lcin_2241 Lcin_2241 selO selO aroH aroH Lcin_2319 Lcin_2319 Lcin_2334 Lcin_2334 dipZ dipZ hspA_1 hspA_1 rpmE rpmE mdh_1 mdh_1 Lcin_2398 Lcin_2398 Lcin_2408 Lcin_2408 Lcin_2415 Lcin_2415 Lcin_2430 Lcin_2430 Lcin_2433 Lcin_2433 aes aes Lcin_2470 Lcin_2470 guaD_2 guaD_2 etfD etfD Lcin_2502 Lcin_2502 truA truA yfiR yfiR Lcin_2540 Lcin_2540 frc frc Lcin_2548 Lcin_2548 Lcin_2549 Lcin_2549 yoaA yoaA Lcin_2593 Lcin_2593 purD purD Lcin_2623 Lcin_2623 Lcin_2648 Lcin_2648 Lcin_2660 Lcin_2660 Lcin_2673 Lcin_2673 Lcin_2675 Lcin_2675 Lcin_2677 Lcin_2677 alkA alkA gltB_3 gltB_3 Lcin_2711 Lcin_2711 traC_2-2 traC_2-2 Lcin_2723 Lcin_2723 Lcin_2731 Lcin_2731 Lcin_2762 Lcin_2762 rpmG rpmG rpmB rpmB nadD nadD ycaJ ycaJ fis_2-2 fis_2-2 Lcin_2881 Lcin_2881 apc3 apc3 rssA rssA rnz_2 rnz_2 fadE_2 fadE_2 tadA tadA gltB_2 gltB_2 puo puo araB araB Lcin_2984 Lcin_2984 Lcin_2987 Lcin_2987 Lcin_2999 Lcin_2999 phbC_3 phbC_3 Lcin_3030 Lcin_3030 traC_1 traC_1 Lcin_3057 Lcin_3057 mvaA mvaA phbC_4 phbC_4 Lcin_3075 Lcin_3075 ppsA ppsA mreB_2 mreB_2 Lcin_3156 Lcin_3156 Lcin_3164 Lcin_3164 hupB hupB Lcin_3214 Lcin_3214 rpsB rpsB bioB bioB Lcin_3244 Lcin_3244 ybeY ybeY Lcin_3287 Lcin_3287 rpsA rpsA rplI rplI rpsR rpsR rpsF rpsF traI_2 traI_2 Lcin_3328 Lcin_3328 IvrA IvrA Lcin_3379 Lcin_3379 Lcin_3381 Lcin_3381 Lcin_3385 Lcin_3385 Lcin_3390 Lcin_3390 yrrB yrrB radC radC Lcin_3424 Lcin_3424 Lcin_3426 Lcin_3426 Lcin_3428 Lcin_3428 Lcin_3430 Lcin_3430 Lcin_3431 Lcin_3431 ycdF ycdF Lcin_0037 Lcin_0037 Lcin_0044 Lcin_0044 ybbO ybbO Lcin_0069 Lcin_0069
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Lcin_3014Ankyrin repeat protein. (1240 aa)
Lcin_0071Hypothetical protein; TfoX N-terminal domain. (109 aa)
Lcin_0072Dehydrogenase. (198 aa)
Lcin_0081Double zinc ribbon. (99 aa)
lvrAProtein LvrA. (302 aa)
Lcin_0152Protein kinase domain protein. (358 aa)
Lcin_0154Hypothetical protein. (61 aa)
Lcin_0161Aminoglycoside 3-N-acetyltransferase. (288 aa)
Lcin_0164Nuclease-related domain protein. (217 aa)
Lcin_0168SEFIR domain protein. (496 aa)
gcdHglutaryl-CoA dehydrogenase. (385 aa)
pdhB_1Pyruvate/2-oxoglutarate dehydrogenase subunit E1. (745 aa)
Lcin_0224Sodium/hydrogen exchanger. (593 aa)
yafPPutative N-acetyltransferase YafP. (159 aa)
Lcin_0230Hypothetical protein. (138 aa)
Lcin_0232FAD dependent oxidoreductase. (401 aa)
Lcin_0256Sterol desaturase-related protein. (403 aa)
Lcin_0259Sigma 54 modulation protein YhbH. (184 aa)
hspA_2Heat shock protein; Belongs to the small heat shock protein (HSP20) family. (164 aa)
prpB2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (294 aa)
folK2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (136 aa)
lip2Alpha/beta hydrolase. (320 aa)
cpoChloroperoxidase. (272 aa)
pilFTwitching motility protein PilF. (270 aa)
odpAPyruvate dehydrogenase E1 alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (357 aa)
odpBPyruvate dehydrogenase E1 subunit beta. (324 aa)
cptBAntitoxin CptB. (81 aa)
rpmF50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (63 aa)
dnaQDNA polymerase III, epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (233 aa)
rnhARibonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (147 aa)
fis_1Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family. (99 aa)
dnaG_1DNA primase. (118 aa)
Lcin_0432Cupin domain protein. (343 aa)
Lcin_0451PRC-barrel domain protein. (113 aa)
tadA_2Cytidine/deoxycytidylate deaminase. (177 aa)
Lcin_0480Sodium/hydrogen exchanger. (418 aa)
fabG_8Polysaccharide biosynthesis dehydrogenase/reductase. (255 aa)
Lcin_0508Hypothetical protein. (265 aa)
Lcin_0523Oxidoreductase. (251 aa)
pds15-cis-phytoene desaturase. (428 aa)
phbC_1PHA synthase. (617 aa)
gltB_1Glutamate synthase; Belongs to the glutamate synthase family. (495 aa)
plaBPhospholipase. (474 aa)
Lcin_0555Transposase IS911. (97 aa)
ychFGTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa)
rplY50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (220 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa)
rpmA50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (92 aa)
Lcin_0579PPR repeat protein. (394 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)
rnz_1Metal-dependent hydrolase of the beta-lactamase superfamily transporter III. (255 aa)
rplQ50S ribosomal protein L17. (127 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (132 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rpmD50S ribosomal protein L30. (61 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (169 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa)
rplF50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (179 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (100 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (183 aa)
rplX50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (109 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (121 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (83 aa)
rpmC50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (64 aa)
rplP50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (218 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (111 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa)
rplD50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (201 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (216 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (105 aa)
Lcin_0652Fatty acid desaturase. (393 aa)
plsC1-acyl-sn-glycerol-3-phosphate acetyltransferase. (246 aa)
fis_2Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family. (93 aa)
sspBStringent starvation protein B. (137 aa)
rpsI30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (143 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (144 aa)
himAIntegration host factor subunit Alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (97 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa)
rpmI50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (66 aa)
ybaBNucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (114 aa)
recRRecombination and repair protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (197 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (91 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (869 aa)
nusATranscription elongation protein nusA; Participates in both transcription termination and antitermination. (492 aa)
hdaATPase regulatory factor involved in DnaA inactivation; Belongs to the DnaA family. HdA subfamily. (230 aa)
recN_1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (554 aa)
fniIsopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (341 aa)
Lcin_0816Electron transfer oxidoreductase. (500 aa)
Lcin_0826Hypothetical protein. (315 aa)
yciAHydrolase. (127 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa)
priAPrimosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (754 aa)
Lcin_08856-pyruvoyl tetrahydropterin synthase. (168 aa)
Lcin_0886Hypothetical protein. (370 aa)
Lcin_0896Hypothetical protein. (309 aa)
Lcin_0897TPR repeat containing protein. (303 aa)
Lcin_0898KQDN repeat-containing protein. (550 aa)
parB_1Chromosome partitioning protein parB; Belongs to the ParB family. (294 aa)
ctaGCytochrome c oxidase assembly protein. (177 aa)
hemGProtoporphyrinogen oxidase. (482 aa)
himDIntegration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (109 aa)
yhhW_1Pirin-like protein; Belongs to the pirin family. (275 aa)
Lcin_1024Phosphotransferase enzyme family protein. (326 aa)
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (632 aa)
fmdAAmidase. (400 aa)
recFRecF recombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (360 aa)
dnaAChromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (458 aa)
Lcin_1081Hypothetical protein. (258 aa)
Lcin_1086Eukaryotic DNA topoisomerase I, catalytic core. (340 aa)
Lcin_1087N-acetyltransferase GCN5. (144 aa)
Lcin_1099Ornithine cyclodeaminase. (323 aa)
Lcin_1100Nucleoside-diphosphate sugar epimerase. (310 aa)
Lcin_1108Reverse transcriptase (RNA-dependent DNA polymerase). (461 aa)
yfcGS-transferase. (212 aa)
phbC_2PHA synthase. (595 aa)
Lcin_1161Patatin-like phospholipase. (405 aa)
strB1Inosamine-phosphate amidinotransferase 1. (373 aa)
Lcin_1195Inner membrane protein. (583 aa)
pkn1Serine/threonine-protein kinase pkn1. (136 aa)
dnaG_2DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (572 aa)
rpsU30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (76 aa)
ribFRiboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family. (326 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (230 aa)
Lcin_1274Hydrolase. (269 aa)
Lcin_1281Hypothetical protein. (298 aa)
rapADNA/RNA helicase SNF2. (1091 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (460 aa)
etfBElectron transfer flavoprotein beta-subunit (Beta-ETF). (249 aa)
etfAElectron transfer flavoprotein, alpha subunit. (312 aa)
recQATP-dependent DNA helicase. (604 aa)
acdAAcyl CoA dehydrogenase. (384 aa)
Lcin_1457Inner membrane protein. (583 aa)
traI_3Putative conjugative transfer protein TraI. (1945 aa)
parB_2Chromosome partitioning protein parB; Belongs to the ParB family. (291 aa)
nocNucleoid occlusion protein; Belongs to the ParB family. (335 aa)
Lcin_1523Putative conjugative transfer protein TrbB. (164 aa)
Lcin_1534acyl-CoA dehydrogenase. (386 aa)
mvaBhydroxymethylglutaryl-CoA lyase. (302 aa)
dtdD-tyr-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
rpsL_130S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (175 aa)
rpsL_230S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (126 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (174 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (144 aa)
nusGTranscription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (181 aa)
Lcin_1601Hypothetical protein. (88 aa)
rplS50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (121 aa)
rpsP30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (85 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (191 aa)
Lcin_1669Hypothetical protein. (81 aa)
yhhW_2Pirin; Belongs to the pirin family. (306 aa)
yqjGS-transferase. (311 aa)
fadE_1Acyl coenzyme A dehydrogenase. (812 aa)
Lcin_1730Putative phosphotransferase. (327 aa)
Lcin_1741Hypothetical protein. (212 aa)
nudCNADH pyrophosphatase. (271 aa)
Lcin_1791Aspartyl/Asparaginyl beta-hydroxylase. (231 aa)
parB_3Partition protein ParB; Belongs to the ParB family. (263 aa)
fabG_43-oxoacyl-ACP reductase. (251 aa)
Lcin_1858LemA from Coxiella burnetii. (193 aa)
hemAGlutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (424 aa)
ankH_1Ankyrin repeat-containing protein H. (467 aa)
ankH_2Ankyrin repeat-containing protein H. (59 aa)
Lcin_1911Glutathione S-transferase (maleylacetoacetate isomerase). (210 aa)
Lcin_1912Fumarylacetoacetate hydrolase. (329 aa)
Lcin_1918acyl-CoA dehydrogenase. (563 aa)
phbC_5Poly-beta-hydroxybutyrate synthase. (580 aa)
yqgFHolliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (139 aa)
smc_2Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1164 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (345 aa)
edd6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (611 aa)
ypmQSCO1/SenC family transporter protein. (213 aa)
ctaACytochrome c oxidase assembly protein. (334 aa)
Lcin_2032Hypothetical protein. (187 aa)
Lcin_2033SURF1 family protein. (244 aa)
Lcin_20462OG-Fe(II) oxygenase. (202 aa)
Lcin_2079Inner membrane protein. (308 aa)
pheA_1Chorismate mutase. (195 aa)
DWF7-dehydrocholesterol reductase. (431 aa)
Lcin_2182Polysaccharide deacetylase. (292 aa)
aidBacyl-CoA dehydrogenase. (562 aa)
Lcin_2241Methyltransferase. (251 aa)
selOHypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (497 aa)
aroH3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. (444 aa)
Lcin_2319GNAT family acetyltransferase. (175 aa)
Lcin_2334PRC-barrel domain protein. (115 aa)
dipZCytochrome C biogenesis protein. (546 aa)
hspA_1Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family. (146 aa)
rpmE50S ribosomal protein L31; Binds the 23S rRNA. (76 aa)
mdh_1Alcohol dehydrogenase. (402 aa)
Lcin_2398Hypothetical protein. (240 aa)
Lcin_2408Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein. (225 aa)
Lcin_2415Patatin-like phospholipase. (368 aa)
Lcin_2430Hypothetical protein. (187 aa)
Lcin_2433DNA ligase D, 3''-phosphoesterase domain protein. (202 aa)
aesAlpha/beta hydrolase. (308 aa)
Lcin_2470Ankyrin repeat protein. (610 aa)
guaD_2Guanine deaminase. (129 aa)
etfDElectron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. (537 aa)
Lcin_2502Ankyrin repeat protein. (393 aa)
truAtRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (262 aa)
yfiRPutative HTH-type transcriptional regulator YfiR. (178 aa)
Lcin_2540GNAT family acetyltransferase. (155 aa)
frcacyl-CoA transferase; Belongs to the CoA-transferase III family. (350 aa)
Lcin_2548Aminoglycoside 3-N-acetyltransferase. (319 aa)
Lcin_2549Phosphotransferase enzyme family protein. (321 aa)
yoaAATP-dependent helicase. (651 aa)
Lcin_2593PAP2 superfamily protein. (217 aa)
purDPhosphoribosylamine-glycine ligase; Belongs to the GARS family. (438 aa)
Lcin_2623Hypothetical protein. (157 aa)
Lcin_2648Hypothetical protein. (268 aa)
Lcin_26605'-nucleotidase. (461 aa)
Lcin_2673Substrate of the Dot/Icm secretion system. (531 aa)
Lcin_2675Oxidase. (220 aa)
Lcin_2677Inosine 5'-monophosphate dehydrogenase. (152 aa)
alkADNA-3-methyladenine glycosylase. (304 aa)
gltB_3Glutamate synthase; Belongs to the glutamate synthase family. (523 aa)
Lcin_2711Inner membrane protein. (643 aa)
traC_2-25' DNA primase TraC. (302 aa)
Lcin_2723Protein LvrA. (270 aa)
Lcin_2731Inner membrane protein. (582 aa)
Lcin_2762Ankyrin repeat protein. (304 aa)
rpmG50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
rpmB50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
nadDNicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (212 aa)
ycaJRecombination protein. (431 aa)
fis_2-2Fis family transcriptional regulator; Belongs to the transcriptional regulatory Fis family. (93 aa)
Lcin_2881Patatin-like phospholipase. (384 aa)
apc3Acetophenone carboxylase gamma subunit. (1204 aa)
rssAPatatin-like phospholipase. (606 aa)
rnz_2Metallo-beta-lactamase. (358 aa)
fadE_2Acyl coenzyme A dehydrogenase. (824 aa)
tadAtRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (149 aa)
gltB_2Glutamate synthase; Belongs to the glutamate synthase family. (499 aa)
puoAmine oxidase. (466 aa)
araBL-arabinolactonase. (300 aa)
Lcin_2984Metallo-beta-lactamase. (452 aa)
Lcin_2987GNAT family acetyltransferase. (144 aa)
Lcin_2999NAD dependent epimerase/dehydratase. (957 aa)
phbC_3PHA synthase. (63 aa)
Lcin_3030RNA binding protein, cold-inducible rrm. (90 aa)
traC_1DNA primase traC. (636 aa)
Lcin_3057Reverse transcriptase. (67 aa)
mvaAHydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. (432 aa)
phbC_4PHA synthase. (593 aa)
Lcin_3075Hypothetical protein. (386 aa)
ppsAPhosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (792 aa)
mreB_2Rod shape determining protein MreB. (345 aa)
Lcin_3156Ankyrin repeat protein. (516 aa)
Lcin_3164PRC-barrel domain protein. (111 aa)
hupBHupB DNA binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (92 aa)
Lcin_3214Ankyrin repeat protein. (77 aa)
rpsB30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (253 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (315 aa)
Lcin_3244Phospholipase, patatin family. (340 aa)
ybeYMetal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (158 aa)
Lcin_3287Phospholipase, patatin family. (879 aa)
rpsA30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (559 aa)
rplI50S ribosomal protein L9; Binds to the 23S rRNA. (149 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (112 aa)
traI_2Conjugative transfer protein TraI. (986 aa)
Lcin_3328Conjugative transfer protein. (168 aa)
IvrAHypothetical protein. (285 aa)
Lcin_3379Hypothetical protein. (98 aa)
Lcin_3381Hypothetical protein. (141 aa)
Lcin_3385Hypothetical protein. (109 aa)
Lcin_3390Hypothetical protein. (168 aa)
yrrBProtein with TPR motifs (protein-protein interaction motif). (566 aa)
radCDNA repair protein RadC; Belongs to the UPF0758 family. (233 aa)
Lcin_3424Cellulose synthase regulator protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (739 aa)
Lcin_3426Putative protoheme IX biogenesis protein. (812 aa)
Lcin_3428CMP-N-acetylneuraminate monooxygenase. (531 aa)
Lcin_3430Cellulose synthase regulator protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (711 aa)
Lcin_3431Hypothetical protein. (677 aa)
ycdFShort-chain dehydrogenases/reductases family protein. (251 aa)
Lcin_0037Hypothetical protein. (73 aa)
Lcin_0044Putative Heparan-alpha-glucosaminide N-acetyltransferase. (372 aa)
ybbOOxidoreductase with NAD(P)-binding Rossmann-fold domain protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (281 aa)
Lcin_0069Ankyrin repeat protein. (159 aa)
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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