STRINGSTRING
BVG18_02925 BVG18_02925 rpoH rpoH AL1T_01450 AL1T_01450 rpoD rpoD BVG18_06995 BVG18_06995
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BVG18_02925Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (483 aa)
rpoHUnannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (289 aa)
AL1T_01450Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (204 aa)
rpoDUnannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (628 aa)
BVG18_06995Unannotated protein. (343 aa)
Your Current Organism:
Acinetobacter lwoffii
NCBI taxonomy Id: 28090
Other names: A. lwoffii, ATCC 15309, Acinetobacter genomosp. 8, Acinetobacter genomosp. 9, Acinetobacter genomospecies 8, Acinetobacter genomospecies 9, CCUG 33984, CIP 64.10, CIP:64.10, DSM 2403, JCM 6840, Moraxella lwoffi, NCAIM B.01101, NCCB 73001, NCTC 5866
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