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kduI_2 kduI_2 nagB_3 nagB_3 rhaM rhaM ALJ49072.1 ALJ49072.1 truA truA ALJ49119.1 ALJ49119.1 ALJ49214.1 ALJ49214.1 nnr nnr eam eam rluA rluA gmhA gmhA entC entC gyrA_2 gyrA_2 mro_3 mro_3 gyrB_2 gyrB_2 gpmI gpmI kduI_1 kduI_1 queA_1 queA_1 truB truB gyrB_1 gyrB_1 fklB_2 fklB_2 fklB_1 fklB_1 bfce bfce topA topA purE purE topB_2 topB_2 ALJ47011.1 ALJ47011.1 pgi pgi gmuF_2 gmuF_2 mutA mutA mutB mutB topB_1 topB_1 slyD slyD ilvC ilvC groL groL rpiA rpiA nanM_2 nanM_2 ALJ46471.1 ALJ46471.1 gpmA gpmA pgcA pgcA ALJ46252.1 ALJ46252.1 ALJ46205.1 ALJ46205.1 nanM_1 nanM_1 hisA hisA ALJ45979.1 ALJ45979.1 ALJ45935.1 ALJ45935.1 fucI fucI trpF trpF trpC trpC dapF dapF lnpD lnpD rluD_1 rluD_1 ALJ45673.1 ALJ45673.1 xylA_1 xylA_1 uxaC uxaC rfbC rfbC gyrA_1 gyrA_1 ce_3 ce_3 wbpI wbpI pgl_1 pgl_1 fcl fcl ce_2 ce_2 ce_1 ce_1 gmuF_1 gmuF_1 mro_2 mro_2 mro_1 mro_1 araA araA rpiB rpiB nagB_1 nagB_1 mip mip nagB_2 nagB_2 fklB_3 fklB_3 rluD_2 rluD_2 murI murI rhaA rhaA rluD_3 rluD_3 ALJ48531.1 ALJ48531.1 tig tig ALJ48568.1 ALJ48568.1 ALJ48569.1 ALJ48569.1 surA surA rluB rluB tpiA tpiA aroF aroF pheA pheA rpe rpe ALJ48688.1 ALJ48688.1 algC algC idi idi queA_2 queA_2 alr alr
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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kduI_24-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (306 aa)
nagB_3Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. (270 aa)
rhaML-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (104 aa)
ALJ49072.1Hypothetical protein. (372 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (267 aa)
ALJ49119.1Hypothetical protein. (171 aa)
ALJ49214.1Periplasmic folding chaperone. (713 aa)
nnrBifunctional NAD(P)H-hydrate repair enzyme Nnr; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to al [...] (503 aa)
eamGlutamate 2,3-aminomutase. (711 aa)
rluARibosomal large subunit pseudouridine synthase A. (564 aa)
gmhAPhosphoheptose isomerase. (219 aa)
entCIsochorismate synthase EntC. (371 aa)
gyrA_2DNA gyrase subunit A. (927 aa)
mro_3Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. (376 aa)
gyrB_2DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (652 aa)
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (504 aa)
kduI_14-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (280 aa)
queA_1S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (352 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (240 aa)
gyrB_1DNA gyrase subunit B. (625 aa)
fklB_2FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase. (292 aa)
fklB_1FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase. (194 aa)
bfceCellobiose 2-epimerase. (396 aa)
topADNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (781 aa)
purEN5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (161 aa)
topB_2DNA topoisomerase 3. (586 aa)
ALJ47011.1Cofactor-independent phosphoglycerate mutase. (402 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (445 aa)
gmuF_2Putative mannose-6-phosphate isomerase GmuF. (576 aa)
mutAMethylmalonyl-CoA mutase small subunit. (633 aa)
mutBMethylmalonyl-CoA mutase large subunit. (715 aa)
topB_1DNA topoisomerase 3. (724 aa)
slyDFKBP-type peptidyl-prolyl cis-trans isomerase SlyD. (192 aa)
ilvCKetol-acid reductoisomerase. (347 aa)
groL60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (545 aa)
rpiARibose-5-phosphate isomerase A. (233 aa)
nanM_2N-acetylneuraminate epimerase. (341 aa)
ALJ46471.1Aldose 1-epimerase. (290 aa)
gpmA2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (248 aa)
pgcAPhosphoglucomutase. (581 aa)
ALJ46252.1Myo-inositol-1-phosphate synthase. (429 aa)
ALJ46205.1Hypothetical protein; L-fucose isomerase, C-terminal domain. (411 aa)
nanM_1N-acetylneuraminate epimerase precursor. (338 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (239 aa)
ALJ45979.1L-Ala-D/L-Glu epimerase. (383 aa)
ALJ45935.1L-fucose mutarotase. (130 aa)
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (591 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (207 aa)
trpCIndole-3-glycerol phosphate synthase; Belongs to the TrpC family. (260 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (269 aa)
lnpDUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (344 aa)
rluD_1Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (306 aa)
ALJ45673.1DNA topoisomerase III. (181 aa)
xylA_1Xylose isomerase; Belongs to the xylose isomerase family. (438 aa)
uxaCUronate isomerase. (468 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (182 aa)
gyrA_1DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (858 aa)
ce_3Cellobiose 2-epimerase. (398 aa)
wbpIUDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (361 aa)
pgl_16-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (243 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (356 aa)
ce_2Cellobiose 2-epimerase. (421 aa)
ce_1Cellobiose 2-epimerase. (387 aa)
gmuF_1Putative mannose-6-phosphate isomerase GmuF. (323 aa)
mro_2Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. (365 aa)
mro_1Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. (379 aa)
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (508 aa)
rpiBRibose-5-phosphate isomerase B. (144 aa)
nagB_1Glucosamine-6-phosphate deaminase 1. (663 aa)
mipOuter membrane protein MIP precursor. (133 aa)
nagB_2Glucosamine-6-phosphate deaminase. (263 aa)
fklB_3FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase. (204 aa)
rluD_2Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (357 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (280 aa)
rhaAL-rhamnose isomerase; Belongs to the rhamnose isomerase family. (418 aa)
rluD_3Ribosomal large subunit pseudouridine synthase D. (223 aa)
ALJ48531.1Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (279 aa)
tigTrigger factor. (451 aa)
ALJ48568.1Peptidylprolyl isomerase. (514 aa)
ALJ48569.1Hypothetical protein. (283 aa)
surAChaperone SurA precursor. (460 aa)
rluBRibosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (497 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
aroFPhospho-2-dehydro-3-deoxyheptonate aldolase. (353 aa)
pheAP-protein. (282 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (216 aa)
ALJ48688.1Hypothetical protein. (231 aa)
algCPhosphomannomutase/phosphoglucomutase. (462 aa)
idiIsopentenyl-diphosphate Delta-isomerase. (172 aa)
queA_2S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (406 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (846 aa)
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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