STRINGSTRING
OKY95698.1 OKY95698.1 pyrH pyrH OKY95701.1 OKY95701.1 frr frr OKY95734.1 OKY95734.1 OKY95704.1 OKY95704.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OKY95698.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the calycin superfamily. Lipocalin family. (170 aa)
pyrHUMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (235 aa)
OKY95701.1Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
frrRibosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (185 aa)
OKY95734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
OKY95704.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
Your Current Organism:
Alistipes putredinis
NCBI taxonomy Id: 28117
Other names: A. putredinis, ATCC 29800, Bacillus putredinis, Bacteroides putredinis, CCUG 45780, CIP 104286, DSM 17216, JCM 16772, Pseudobacterium putredinis, Ristella putredinis
Server load: low (32%) [HD]