STRINGSTRING
murE murE OKY96514.1 OKY96514.1 OKY96535.1 OKY96535.1 murF murF murD murD mraY mraY OKY96882.1 OKY96882.1 OKY96796.1 OKY96796.1 ddl ddl OKY95680.1 OKY95680.1 OKY95683.1 OKY95683.1 OKY94905.1 OKY94905.1 murA murA murB murB murG murG murC murC uppP uppP OKY94207.1 OKY94207.1 OKY94182.1 OKY94182.1 OKY93825.1 OKY93825.1 OKY93491.1 OKY93491.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
murEUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (486 aa)
OKY96514.1DUF4837 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
OKY96535.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
murFUDP-N-acetylmuramyl peptide synthase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (419 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (450 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (414 aa)
OKY96882.1Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. (750 aa)
OKY96796.1Bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (790 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (331 aa)
OKY95680.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
OKY95683.1Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)
OKY94905.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (801 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (436 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (336 aa)
murGUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (369 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (459 aa)
uppPUDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (270 aa)
OKY94207.1Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (243 aa)
OKY94182.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
OKY93825.1Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
OKY93491.1PASTA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
Your Current Organism:
Alistipes putredinis
NCBI taxonomy Id: 28117
Other names: A. putredinis, ATCC 29800, Bacillus putredinis, Bacteroides putredinis, CCUG 45780, CIP 104286, DSM 17216, JCM 16772, Pseudobacterium putredinis, Ristella putredinis
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