STRINGSTRING
KXB32313.1 KXB32313.1 KXB32409.1 KXB32409.1 KXB32437.1 KXB32437.1 KXB32438.1 KXB32438.1 KXB32439.1 KXB32439.1 KXB32534.1 KXB32534.1 KXB32090.1 KXB32090.1 KXB32244.1 KXB32244.1 KXB31589.1 KXB31589.1 KXB31936.1 KXB31936.1 KXB31655.1 KXB31655.1 KXB31656.1 KXB31656.1 KXB31657.1 KXB31657.1 KXB31778.1 KXB31778.1 KXB31284.1 KXB31284.1 KXB31293.1 KXB31293.1 KXB31562.1 KXB31562.1 KXB31563.1 KXB31563.1 KXB30667.1 KXB30667.1 KXB30674.1 KXB30674.1 KXB30680.1 KXB30680.1 KXB30736.1 KXB30736.1 KXB30825.1 KXB30825.1 KXB30830.1 KXB30830.1 KXB30901.1 KXB30901.1 KXB31239.1 KXB31239.1 nuoN nuoN KXB30909.1 KXB30909.1 KXB30910.1 KXB30910.1 nuoK nuoK KXB30912.1 KXB30912.1 nuoI nuoI nuoH nuoH KXB30915.1 KXB30915.1 KXB30916.1 KXB30916.1 KXB30917.1 KXB30917.1 nuoD nuoD nuoC nuoC nuoB nuoB nuoA nuoA KXB30998.1 KXB30998.1 KXB31253.1 KXB31253.1 KXB31028.1 KXB31028.1 KXB31029.1 KXB31029.1 KXB31050.1 KXB31050.1 KXB29958.1 KXB29958.1 KXB29982.1 KXB29982.1 KXB29992.1 KXB29992.1 serS serS KXB30616.1 KXB30616.1 KXB30234.1 KXB30234.1 KXB30293.1 KXB30293.1 KXB30346.1 KXB30346.1 KXB30352.1 KXB30352.1 alaS alaS KXB30456.1 KXB30456.1 KXB29668.1 KXB29668.1 KXB29670.1 KXB29670.1 KXB29714.1 KXB29714.1 KXB29823.1 KXB29823.1 KXB28913.1 KXB28913.1 KXB28932.1 KXB28932.1 KXB29040.1 KXB29040.1 KXB29041.1 KXB29041.1 gmk gmk KXB29104.1 KXB29104.1 KXB29107.1 KXB29107.1 KXB29110.1 KXB29110.1 KXB29111.1 KXB29111.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KXB32313.1Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
KXB32409.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
KXB32437.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (198 aa)
KXB32438.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (433 aa)
KXB32439.1Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
KXB32534.1Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (626 aa)
KXB32090.1Trypsin; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
KXB32244.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
KXB31589.1HIRAN protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
KXB31936.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
KXB31655.1NADH-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
KXB31656.1NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
KXB31657.1NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
KXB31778.1Cyclic beta 1-2 glucan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2861 aa)
KXB31284.1Cytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (531 aa)
KXB31293.1NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
KXB31562.1acyl--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)
KXB31563.1Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
KXB30667.1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
KXB30674.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
KXB30680.1Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
KXB30736.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
KXB30825.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
KXB30830.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
KXB30901.1NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
KXB31239.1NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (627 aa)
nuoNNADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (492 aa)
KXB30909.1NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
KXB30910.1NADH:ubiquinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (678 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (103 aa)
KXB30912.1NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (198 aa)
nuoINADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
nuoHNADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (349 aa)
KXB30915.1NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (776 aa)
KXB30916.1NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (442 aa)
KXB30917.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
nuoDNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa)
nuoCNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (201 aa)
nuoBNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (158 aa)
nuoANADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (123 aa)
KXB30998.1Cytochrome-c oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
KXB31253.1Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
KXB31028.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
KXB31029.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
KXB31050.1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
KXB29958.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
KXB29982.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1890 aa)
KXB29992.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
serSserine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (426 aa)
KXB30616.1Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
KXB30234.1Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (163 aa)
KXB30293.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
KXB30346.1Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
KXB30352.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
alaSalanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (873 aa)
KXB30456.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa)
KXB29668.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
KXB29670.1Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
KXB29714.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
KXB29823.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (925 aa)
KXB28913.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
KXB28932.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
KXB29040.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (335 aa)
KXB29041.1Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (202 aa)
KXB29104.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
KXB29107.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
KXB29110.1Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
KXB29111.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family. (452 aa)
Your Current Organism:
Dechloromonas denitrificans
NCBI taxonomy Id: 281362
Other names: ATCC BAA-841, D. denitrificans, DSM 15892, Dechloromonas denitrificans Horn et al. 2005, strain ED1
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