Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXB29107.1 | KXB30901.1 | AT959_20060 | AT959_09305 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| KXB29107.1 | KXB30909.1 | AT959_20060 | AT959_09360 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| KXB29107.1 | KXB30915.1 | AT959_20060 | AT959_09390 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.934 |
| KXB29107.1 | KXB30917.1 | AT959_20060 | AT959_09400 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| KXB29107.1 | KXB31656.1 | AT959_20060 | AT959_04645 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| KXB29107.1 | KXB31936.1 | AT959_20060 | AT959_04630 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| KXB29107.1 | sdhB | AT959_20060 | AT959_08800 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.706 |
| KXB30520.1 | KXB30521.1 | AT959_14425 | AT959_14430 | Cytochrome C oxidase Cbb3; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
| KXB30520.1 | KXB30890.1 | AT959_14425 | AT959_09235 | Cytochrome C oxidase Cbb3; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| KXB30520.1 | sdhB | AT959_14425 | AT959_08800 | Cytochrome C oxidase Cbb3; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
| KXB30521.1 | KXB30520.1 | AT959_14430 | AT959_14425 | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | Cytochrome C oxidase Cbb3; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KXB30521.1 | KXB30909.1 | AT959_14430 | AT959_09360 | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| KXB30521.1 | KXB30917.1 | AT959_14430 | AT959_09400 | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
| KXB30521.1 | KXB31656.1 | AT959_14430 | AT959_04645 | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| KXB30521.1 | KXB31936.1 | AT959_14430 | AT959_04630 | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| KXB30521.1 | sdhB | AT959_14430 | AT959_08800 | Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
| KXB30709.1 | KXB30901.1 | AT959_08200 | AT959_09305 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| KXB30709.1 | KXB30909.1 | AT959_08200 | AT959_09360 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| KXB30709.1 | KXB30915.1 | AT959_08200 | AT959_09390 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.934 |
| KXB30709.1 | KXB30917.1 | AT959_08200 | AT959_09400 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
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