(61 nodes) Binding-protein-dependent transport system inner membrane component network (Cronobacter sakazakii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKE93601.1	Amino acid ABC transporter permease. (393 aa)
	AKE93034.1	Methionine ABC transporter permease. (217 aa)
	AKE93170.1	Thiamine ABC transporter permease. (536 aa)
	AKE93313.1	Arabinogalactan ABC transporter permease. (283 aa)
	AKE93314.1	Maltose/maltodextrin ABC transporter, permease protein. (435 aa)
	AKE93602.1	Amino acid ABC transporter permease. (365 aa)
	AKE93894.1	Phosphate transporter permease subunit PtsA. (296 aa)
	AKE93895.1	Phosphate transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (319 aa)
	AKE94074.1	Dipeptide transport system permease protein. (339 aa)
	AKE94075.1	Dipeptide transport system permease protein. (300 aa)
	AKE94145.1	Glycerol-3-phosphate transporter permease. (295 aa)
	ugpE	Glycerol-3-phosphate transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (281 aa)
	AKE94321.1	Maltose transporter permease. (296 aa)
	AKE94322.1	Maltose/maltodextrin ABC transporter permease protein. (514 aa)
	AKE94675.1	ABC transporter permease. (304 aa)
	AKE94676.1	ABC transporter membrane protein. (296 aa)
	AKE94768.1	Amino acid-binding protein. (238 aa)
	AKE94786.1	Glycine/betaine ABC transporter permease. (356 aa)
	AKE94991.1	Sulfate/thiosulfate transporter permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (276 aa)
	AKE94992.1	Sulfate/thiosulfate transporter permease subunit. (289 aa)
	AKE95174.1	Histidine/lysine/arginine/ornithine ABC transporter permease HisQ. (228 aa)
	AKE95175.1	Histidine/lysine/arginine/ornithine ABC transporter permease HisM. (238 aa)
	AKE95342.1	Inner membrane ABC transporter permease protein YejE. (341 aa)
	AKE95343.1	Microcin C ABC transporter permease YejB. (365 aa)
	AKE95389.1	Osmoprotectant uptake system permease YehY. (377 aa)
	AKE95391.1	Osmoprotectant uptake system permease YehW. (243 aa)
	AKE95575.1	Amino acid ABC transporter permease. (222 aa)
	AKE95764.1	Nitrate transport permease NrtB. (293 aa)
	AKE95791.1	Oligopeptide transporter permease. (306 aa)
	AKE95792.1	Oligopeptide ABC transport system permease protein OppC. (302 aa)
	AKE95844.1	Antimicrobial peptide ABC transporter permease SapC. (296 aa)
	AKE95845.1	Antimicrobial peptide ABC transporter permease SapB. (321 aa)
	AKE95854.1	Inner membrane ABC transporter permease protein YcjO. (293 aa)
	AKE95855.1	Inner membrane ABC transporter permease protein YcjP. (280 aa)
	osmW	Glycine/betaine/carnitine/choline transport system permease OpuCB. (215 aa)
	AKE96006.1	Putative osmoprotectant transport system permease. (237 aa)
	AKE96111.1	Putative ABC transporter permease. (288 aa)
	AKE96122.1	Binding-protein-dependent transport system inner membrane component. (281 aa)
	AKE96123.1	Binding-protein-dependent transport system inner membrane component II. (304 aa)
	AKE96157.1	Binding-protein-dependent transport system inner membrane component. (268 aa)
	AKE96158.1	Inner membrane ABC transporter permease protein YdcU. (314 aa)
	AKE96173.1	ABC transporter permease. (314 aa)
	AKE96174.1	Hypothetical protein. (282 aa)
	AKE96515.1	Putrescine/spermidine ABC transporter membrane protein PotB. (285 aa)
	AKE96516.1	Putrescine/spermidine ABC transporter membrane protein PotC. (270 aa)
	AKE96661.1	Alkanesulfonates transporter permease. (263 aa)
	AKE96725.1	Transporter permease subunit ArtQ. (238 aa)
	AKE96726.1	Arginine transporter permease subunit ArtM. (222 aa)
	AKE96730.1	Putrescine transport system permease PotI. (281 aa)
	AKE96731.1	Putrescine transport system permease PotH. (319 aa)
	AKE96754.1	Glutathione ABC transporter permease GsiD. (303 aa)
	AKE96755.1	Glutathione ABC transporter permease GsiC. (306 aa)
	AKE96777.1	Glutamine transport system permease protein GlnP. (219 aa)
	AKE96828.1	Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (230 aa)
	AKE96914.1	Hypothetical protein. (246 aa)
	AKE96915.1	Glutamate/aspartate transporter permease GltK. (224 aa)
	AKE96945.1	Sugar ABC transporter permease. (281 aa)
	AKE96946.1	ABC transporter. (317 aa)
	AKE97048.1	D-methionine transport system permease metI. (224 aa)
	AKE97157.1	Taurine transporter subunit TauC. (275 aa)
	AKE97194.1	D-methionine transport system permease. (222 aa)

Your Current Organism:

Cronobacter sakazakii

NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKE93034.1	AKE97048.1	CSK29544_00068	CSK29544_04106	Methionine ABC transporter permease.	D-methionine transport system permease metI.	0.905
AKE93034.1	AKE97194.1	CSK29544_00068	CSK29544_04253	Methionine ABC transporter permease.	D-methionine transport system permease.	0.907
AKE93313.1	AKE93314.1	CSK29544_00349	CSK29544_00350	Arabinogalactan ABC transporter permease.	Maltose/maltodextrin ABC transporter, permease protein.	0.995
AKE93313.1	AKE94145.1	CSK29544_00349	CSK29544_01184	Arabinogalactan ABC transporter permease.	Glycerol-3-phosphate transporter permease.	0.846
AKE93313.1	AKE94322.1	CSK29544_00349	CSK29544_01361	Arabinogalactan ABC transporter permease.	Maltose/maltodextrin ABC transporter permease protein.	0.895
AKE93313.1	AKE94676.1	CSK29544_00349	CSK29544_01717	Arabinogalactan ABC transporter permease.	ABC transporter membrane protein.	0.908
AKE93313.1	AKE95854.1	CSK29544_00349	CSK29544_02903	Arabinogalactan ABC transporter permease.	Inner membrane ABC transporter permease protein YcjO.	0.913
AKE93313.1	AKE96946.1	CSK29544_00349	CSK29544_04001	Arabinogalactan ABC transporter permease.	ABC transporter.	0.917
AKE93314.1	AKE93313.1	CSK29544_00350	CSK29544_00349	Maltose/maltodextrin ABC transporter, permease protein.	Arabinogalactan ABC transporter permease.	0.995
AKE93314.1	AKE94321.1	CSK29544_00350	CSK29544_01360	Maltose/maltodextrin ABC transporter, permease protein.	Maltose transporter permease.	0.981
AKE93314.1	AKE94675.1	CSK29544_00350	CSK29544_01716	Maltose/maltodextrin ABC transporter, permease protein.	ABC transporter permease.	0.899
AKE93314.1	AKE95855.1	CSK29544_00350	CSK29544_02904	Maltose/maltodextrin ABC transporter, permease protein.	Inner membrane ABC transporter permease protein YcjP.	0.891
AKE93314.1	AKE96945.1	CSK29544_00350	CSK29544_04000	Maltose/maltodextrin ABC transporter, permease protein.	Sugar ABC transporter permease.	0.881
AKE93314.1	ugpE	CSK29544_00350	CSK29544_01185	Maltose/maltodextrin ABC transporter, permease protein.	Glycerol-3-phosphate transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.764
AKE93601.1	AKE93602.1	CSK29544_00637	CSK29544_00638	Amino acid ABC transporter permease.	Amino acid ABC transporter permease.	0.998
AKE93601.1	AKE95174.1	CSK29544_00637	CSK29544_02217	Amino acid ABC transporter permease.	Histidine/lysine/arginine/ornithine ABC transporter permease HisQ.	0.471
AKE93601.1	AKE95175.1	CSK29544_00637	CSK29544_02218	Amino acid ABC transporter permease.	Histidine/lysine/arginine/ornithine ABC transporter permease HisM.	0.434
AKE93601.1	AKE95575.1	CSK29544_00637	CSK29544_02622	Amino acid ABC transporter permease.	Amino acid ABC transporter permease.	0.612
AKE93601.1	AKE96725.1	CSK29544_00637	CSK29544_03780	Amino acid ABC transporter permease.	Transporter permease subunit ArtQ.	0.480
AKE93601.1	AKE96726.1	CSK29544_00637	CSK29544_03781	Amino acid ABC transporter permease.	Arginine transporter permease subunit ArtM.	0.463

page 1 of 15

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About