(18 nodes) Signal transduction histidine kinase, dimerisation/phosphoacceptor domain network (Yersinia kristensenii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cpxA_2	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (458 aa)
	bvgS	Hpt domain protein; [T] COG0642 Signal transduction histidine kinase. (1285 aa)
	rcsC_3	rcsC Alpha-Beta-Loop family protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (932 aa)
	rstB	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (437 aa)
	phoR	phoR_proteo: phosphate regulon sensor kinase PhoR; [T] COG0642 Signal transduction histidine kinase. (438 aa)
	creC	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (475 aa)
	arcB	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (778 aa)
	glnL	PAS fold family protein; [T] COG3852 Signal transduction histidine kinase, nitrogen specific. (349 aa)
	fixL	[T] COG0642 Signal transduction histidine kinase. (449 aa)
	envZ	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (450 aa)
	rcsC_1	Response regulator; [T] COG0642 Signal transduction histidine kinase. (945 aa)
	basS_1	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (354 aa)
	barA	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (920 aa)
	glrK	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (478 aa)
	baeS	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (458 aa)
	cpxA_1	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (455 aa)
	kdpD	Universal stress family protein; [T] COG2205 Osmosensitive K+ channel histidine kinase. (900 aa)
	phoQ	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (468 aa)

Your Current Organism:

Yersinia kristensenii

NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
arcB	baeS	CH54_3037	CH54_1371	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.875
arcB	barA	CH54_3037	CH54_1711	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.999
arcB	basS_1	CH54_3037	CH54_1992	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.891
arcB	bvgS	CH54_3037	CH54_896	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	Hpt domain protein; [T] COG0642 Signal transduction histidine kinase.	0.999
arcB	cpxA_1	CH54_3037	CH54_1298	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.885
arcB	cpxA_2	CH54_3037	CH54_2667	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.906
arcB	creC	CH54_3037	CH54_3416	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.882
arcB	envZ	CH54_3037	CH54_2319	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.904
arcB	fixL	CH54_3037	CH54_2508	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	[T] COG0642 Signal transduction histidine kinase.	0.849
arcB	glnL	CH54_3037	CH54_2565	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	PAS fold family protein; [T] COG3852 Signal transduction histidine kinase, nitrogen specific.	0.602
arcB	glrK	CH54_3037	CH54_1483	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.875
arcB	kdpD	CH54_3037	CH54_1167	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	Universal stress family protein; [T] COG2205 Osmosensitive K+ channel histidine kinase.	0.868
arcB	phoQ	CH54_3037	CH54_111	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.894
arcB	phoR	CH54_3037	CH54_3644	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	phoR_proteo: phosphate regulon sensor kinase PhoR; [T] COG0642 Signal transduction histidine kinase.	0.869
arcB	rcsC_1	CH54_3037	CH54_2201	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	Response regulator; [T] COG0642 Signal transduction histidine kinase.	0.999
arcB	rcsC_3	CH54_3037	CH54_3966	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	rcsC Alpha-Beta-Loop family protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	0.999
arcB	rstB	CH54_3037	CH54_372	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.886
baeS	arcB	CH54_1371	CH54_3037	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.875
baeS	barA	CH54_1371	CH54_1711	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.753
baeS	bvgS	CH54_1371	CH54_896	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	Hpt domain protein; [T] COG0642 Signal transduction histidine kinase.	0.531