STRINGSTRING
CCO60442.1 CCO60442.1 CCO60616.1 CCO60616.1 CCO60625.1 CCO60625.1 CCO60655.1 CCO60655.1 CCO60777.1 CCO60777.1 CCO60999.1 CCO60999.1 CCO61002.1 CCO61002.1 CCO61042.1 CCO61042.1 CCO61051.1 CCO61051.1 CCO61126.1 CCO61126.1 CCO61175.1 CCO61175.1 CCO61248.1 CCO61248.1 CCO61377.1 CCO61377.1 CCO59870.1 CCO59870.1 CCO59852.1 CCO59852.1 glnL glnL CCO59440.1 CCO59440.1 CCO59298.1 CCO59298.1 CCO58925.1 CCO58925.1 CCO58864.1 CCO58864.1 CCO58307.1 CCO58307.1 CCO58305.1 CCO58305.1 CCO56624.1 CCO56624.1 phoR phoR arcB arcB CCO56484.1 CCO56484.1 CCO58201.1 CCO58201.1 CCO58176.1 CCO58176.1 tyrR tyrR CCO57947.1 CCO57947.1 CCO57772.1 CCO57772.1 CCO57708.1 CCO57708.1 CCO57694.1 CCO57694.1 CCO57686.1 CCO57686.1 CCO57597.1 CCO57597.1 CCO57278.1 CCO57278.1 CCO57108.1 CCO57108.1 fleS fleS CCO56641.1 CCO56641.1 CCO59966.1 CCO59966.1 CCO59998.1 CCO59998.1 CCO60307.1 CCO60307.1 CCO60398.1 CCO60398.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCO60442.1Putative Diguanylate cyclase with PAS/PAC sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (293 aa)
CCO60616.1Putative Methyl-accepting chemotaxis protein (MCP) fused with PAS/PAC domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (1012 aa)
CCO60625.1Putative PAS and GGDEF domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (488 aa)
CCO60655.1Putative phosphate regulon sensor kinase PhoR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (807 aa)
CCO60777.1Putative GGEF/PAS-domains containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (794 aa)
CCO60999.1Putative PAS/PAC domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (147 aa)
CCO61002.1Putative PAS and GGDEF domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (404 aa)
CCO61042.1Putative EAL,GGDEF and PAS domains carrying protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (647 aa)
CCO61051.1Putative PAS domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (596 aa)
CCO61126.1Putative EAL,GGDEF,PAS/PAC domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (723 aa)
CCO61175.1Putative GGDEF and PAS domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (317 aa)
CCO61248.1Putative Signal transduction histidine kinase regulating C4-dicarboxylate transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (697 aa)
CCO61377.1Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (667 aa)
CCO59870.1Conserved hypothetical protein with PAS domain and Transcription regulator LuxR, C-terminal part; Homologs of previously reported genes of unknown function. (234 aa)
CCO59852.1Putative Methyl-accepting chemotaxis protein (MCP) fused with PAS/PAC domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (939 aa)
glnLNitrogen regulation protein NR(II); Function of homologous gene experimentally demonstrated in an other organism; regulator. (351 aa)
CCO59440.1Putative TWO COMPONENT HISTIDINE KINASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1049 aa)
CCO59298.1Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1143 aa)
CCO58925.1Putative Two component Sensor/histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (624 aa)
CCO58864.1Putative sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1111 aa)
CCO58307.1Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1172 aa)
CCO58305.1Putative PAS/EAL family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (825 aa)
CCO56624.1Putative EAL,GGDEF and PAS domains carrying protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (678 aa)
phoRPhosphate regulon sensor protein phoR; Function of homologous gene experimentally demonstrated in an other organism; regulator. (435 aa)
arcBAerobic respiration control sensor protein arcB; Function of homologous gene experimentally demonstrated in an other organism; regulator. (787 aa)
CCO56484.1Putative PAS and GGDEF domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (577 aa)
CCO58201.1Putative Diguanylate phosphodiesterase fused with Diguanylate cyclase and PAS domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (899 aa)
CCO58176.1Putative TWO-COMPONENT SENSOR PROTEIN HISTIDINE PROTEIN KINASE (DHKK, DHKJ); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (931 aa)
tyrRTranscriptional regulatory protein tyrR; Function of homologous gene experimentally demonstrated in an other organism; regulator. (513 aa)
CCO57947.1Putative SENSOR KINASE DPIB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (535 aa)
CCO57772.1Putative GGDEF and PAS/PAC family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (318 aa)
CCO57708.1Putative SENSORY TRANSDUCTION HISTIDINE KINASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (662 aa)
CCO57694.1Putative Aerotaxis sensor receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (518 aa)
CCO57686.1Putative TWO-COMPONENT SENSOR PROTEIN HISTIDINE PROTEIN KINASE (DHKK, DHKJ); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1063 aa)
CCO57597.1Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1492 aa)
CCO57278.1Putative TWO COMPONENT HISTIDINE KINASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (822 aa)
CCO57108.1Putative TWO COMPONENT HISTIDINE KINASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (503 aa)
fleSSensor protein FleS; Function of homologous gene experimentally demonstrated in an other organism; regulator. (346 aa)
CCO56641.1Putative EAL,GGDEF and PAS domains carrying protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (814 aa)
CCO59966.1Conserved hypothetical protein with PAS domain; Homologs of previously reported genes of unknown function. (142 aa)
CCO59998.1Putative Chemotaxis methyl-accepting receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (520 aa)
CCO60307.1Putative TWO-COMPONENT SENSOR PROTEIN HISTIDINE PROTEIN KINASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (1322 aa)
CCO60398.1Putative TWO COMPONENT Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (682 aa)
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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