STRINGSTRING
CCO57933.1 CCO57933.1 CCO57859.1 CCO57859.1 CCO57666.1 CCO57666.1 CCO57420.1 CCO57420.1 CCO57123.1 CCO57123.1 pdhR pdhR CCO58005.1 CCO58005.1 CCO57863.1 CCO57863.1 uxuR uxuR CCO61755.1 CCO61755.1 CCO61194.1 CCO61194.1 CCO60752.1 CCO60752.1 CCO60548.1 CCO60548.1 CCO60460.1 CCO60460.1 CCO60377.1 CCO60377.1 CCO60253.1 CCO60253.1 CCO60218.1 CCO60218.1 CCO58924.1 CCO58924.1 CCO58802.1 CCO58802.1 CCO58798.1 CCO58798.1 fadR fadR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCO57933.1Putative Propionate catabolism operon transcriptional regulator of GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (226 aa)
CCO57859.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (238 aa)
CCO57666.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (242 aa)
CCO57420.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (238 aa)
CCO57123.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (264 aa)
pdhRPyruvate dehydrogenase complex repressor; Function of homologous gene experimentally demonstrated in an other organism; regulator. (256 aa)
CCO58005.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (243 aa)
CCO57863.1Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (264 aa)
uxuRUxu operon transcriptional regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator. (255 aa)
CCO61755.1Putative Bacterial regulatory protein GntR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (226 aa)
CCO61194.1Putative transcriptional regulator, GntR family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (244 aa)
CCO60752.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (247 aa)
CCO60548.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (227 aa)
CCO60460.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (235 aa)
CCO60377.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (265 aa)
CCO60253.1Putative Transcriptional regulator, GntR family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (221 aa)
CCO60218.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (233 aa)
CCO58924.1Putative Transcriptional regulator LuxZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (223 aa)
CCO58802.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (242 aa)
CCO58798.1Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (244 aa)
fadRFatty acid metabolism regulator protein; Multifunctional regulator of fatty acid metabolism. (279 aa)
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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