STRINGSTRING
sseA sseA metA metA mdeA mdeA tyrB tyrB SFG39136.1 SFG39136.1 patB patB SFG36654.1 SFG36654.1 metZ metZ lasI_1 lasI_1 rsmA rsmA scpB scpB SFG55510.1 SFG55510.1 SFG55561.1 SFG55561.1 SFG55590.1 SFG55590.1 speE speE yitJ yitJ metH metH SFG54243.1 SFG54243.1 cysK cysK sbnA sbnA vapC1 vapC1 fitB_2 fitB_2 SFG71769.1 SFG71769.1 hom hom ydiO ydiO aspC_2 aspC_2 fitB_1 fitB_1 higA-2 higA-2 sdaA sdaA SFG82091.1 SFG82091.1 SFG82205.1 SFG82205.1 SFG83887.1 SFG83887.1 SFG84182.1 SFG84182.1 mtnP mtnP SFF80555.1 SFF80555.1 mdh mdh ahcY ahcY ilvE_1 ilvE_1 asd2 asd2 ilvE_2 ilvE_2 lasI_2 lasI_2 ilvE_3 ilvE_3 gshB gshB serA serA msrC msrC lysX lysX ask ask gshA gshA metK metK cysE cysE metC metC SFG24732.1 SFG24732.1 acsE acsE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sseAThiosulfate/3-mercaptopyruvate sulfurtransferase. (281 aa)
metAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (304 aa)
mdeAO-acetylhomoserine sulfhydrylase. (435 aa)
tyrBAromatic amino acid aminotransferase apoenzyme. (394 aa)
SFG39136.1Hypothetical protein. (157 aa)
patBCystathione beta-lyase. (394 aa)
SFG36654.1Cytosine/adenosine deaminase. (441 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (397 aa)
lasI_1N-acyl-L-homoserine lactone synthetase; Belongs to the autoinducer synthase family. (195 aa)
rsmADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (276 aa)
scpBCondensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (213 aa)
SFG55510.1S-adenosylmethionine decarboxylase. (62 aa)
SFG55561.1Spermidine synthase. (102 aa)
SFG55590.1Spermidine synthase. (67 aa)
speESpermine/spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. (288 aa)
yitJ5-methyltetrahydrofolate--homocysteine methyltransferase. (337 aa)
metH5-methyltetrahydrofolate--homocysteine methyltransferase. (233 aa)
SFG54243.1Aspartate aminotransferase. (400 aa)
cysKCysteine synthase A. (342 aa)
sbnACysteine synthase A. (381 aa)
vapC1tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (129 aa)
fitB_2Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (137 aa)
SFG71769.1Cytochrome c oxidase accessory protein FixG. (545 aa)
homHomoserine dehydrogenase. (429 aa)
ydiODNA (cytosine-5)-methyltransferase 1. (408 aa)
aspC_2Aspartate/methionine/tyrosine aminotransferase. (382 aa)
fitB_1Hypothetical protein. (142 aa)
higA-2Putative transcriptional regulator. (95 aa)
sdaAL-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (472 aa)
SFG82091.1Plasmid recombination enzyme. (504 aa)
SFG82205.1Putative transcriptional regulator. (91 aa)
SFG83887.1Hypothetical protein. (140 aa)
SFG84182.1DNA (cytosine-5)-methyltransferase 1. (449 aa)
mtnPMethylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. (285 aa)
SFF80555.1Hypothetical protein. (344 aa)
mdhMalate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (320 aa)
ahcYAdenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (462 aa)
ilvE_1Branched-chain amino acid aminotransferase. (302 aa)
asd2Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (340 aa)
ilvE_2Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (289 aa)
lasI_2N-acyl-L-homoserine lactone synthetase. (209 aa)
ilvE_3Branched-chain amino acid aminotransferase. (287 aa)
gshBGlutathione synthase; Belongs to the prokaryotic GSH synthase family. (317 aa)
serAD-3-phosphoglycerate dehydrogenase/phosphoserine aminotransferase,TIGR01365/phosphoserine aminotransferase, putative,TIGR01366; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (926 aa)
msrCGAF domain-containing protein. (166 aa)
lysXSSU ribosomal protein S6P modification protein; Belongs to the RimK family. (301 aa)
askAspartate kinase; Belongs to the aspartokinase family. (415 aa)
gshAGlutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily. (456 aa)
metKMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (394 aa)
cysESerine O-acetyltransferase. (272 aa)
metCCystathionine gamma-synthase. (398 aa)
SFG24732.15-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase. (376 aa)
acsE5-methyltetrahydrofolate--homocysteine methyltransferase. (328 aa)
Your Current Organism:
Jannaschia rubra
NCBI taxonomy Id: 282197
Other names: CECT 5088, DSM 16279, J. rubra, Jannaschia rubra Macian et al. 2005, strain 4SM3
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