11 items (Macrostomum lignano) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A267G1Z9	Uncharacterized protein. (395 aa)
	A0A267F701	Uncharacterized protein. (368 aa)
	A0A267F413	Uncharacterized protein. (613 aa)
	A0A267EKM0	Uncharacterized protein. (374 aa)
	A0A267EH89	Uncharacterized protein. (1231 aa)
	A0A267EAE9	Uncharacterized protein. (1223 aa)
	A0A1I8GF11	Uncharacterized protein. (372 aa)
	A0A267G225	Uncharacterized protein. (299 aa)
	A0A267GQ58	Uncharacterized protein. (368 aa)
	A0A267FRK0	Uncharacterized protein. (372 aa)
	A0A267FXY3	Uncharacterized protein. (293 aa)

Your Current Organism:

Macrostomum lignano

NCBI taxonomy Id: 282301
Other names: M. lignano

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8GF11	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1I8GF11	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1I8GF11	A0A267F413	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A1I8GF11	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A267EAE9	A0A267EKM0	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267F413	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A267EAE9	A0A267F701	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267FRK0	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267FXY3	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267G1Z9	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267G225	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EAE9	A0A267GQ58	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EH89	A0A1I8GF11	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EH89	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A267EH89	A0A267EKM0	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EH89	A0A267F413	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A267EH89	A0A267F701	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EH89	A0A267FRK0	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A267EH89	A0A267FXY3	Uncharacterized protein.	Uncharacterized protein.	0.954