12 items (Macrostomum lignano) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A267EU38	Uncharacterized protein. (453 aa)
	A0A267GN65	Uncharacterized protein. (468 aa)
	A0A267G6F8	Uncharacterized protein. (453 aa)
	A0A267G4H2	Uncharacterized protein. (473 aa)
	A0A267FVM4	Uncharacterized protein. (507 aa)
	A0A267EH89	Uncharacterized protein. (1231 aa)
	A0A267ED27	Uncharacterized protein. (364 aa)
	A0A267EAE9	Uncharacterized protein. (1223 aa)
	A0A267E3T0	Uncharacterized protein. (473 aa)
	A0A267DPK9	Uncharacterized protein. (454 aa)
	A0A267DMK1	Uncharacterized protein. (507 aa)
	A0A267DEJ3	Uncharacterized protein. (507 aa)

Your Current Organism:

Macrostomum lignano

NCBI taxonomy Id: 282301
Other names: M. lignano

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A267DEJ3	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267DEJ3	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267DMK1	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267DMK1	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267DPK9	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267DPK9	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267E3T0	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267E3T0	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267DEJ3	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267DMK1	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267DPK9	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267E3T0	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267ED27	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267EH89	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A267EAE9	A0A267EU38	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267FVM4	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267G4H2	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267G6F8	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267EAE9	A0A267GN65	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A267ED27	A0A267EAE9	Uncharacterized protein.	Uncharacterized protein.	0.715