12 items (Macrostomum lignano) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A267DW20	Uncharacterized protein. (242 aa)
	A0A267GTM6	Uncharacterized protein. (718 aa)
	A0A267G9C4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (536 aa)
	A0A267G6Y0	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (533 aa)
	A0A267FYQ8	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (533 aa)
	A0A267FUS4	Uncharacterized protein. (719 aa)
	A0A267FMF6	Uncharacterized protein. (718 aa)
	A0A267FIM6	Uncharacterized protein. (480 aa)
	A0A267FBM2	Uncharacterized protein. (1755 aa)
	A0A267EC43	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (541 aa)
	A0A267E886	Uncharacterized protein. (1758 aa)
	A0A267DE46	Uncharacterized protein. (479 aa)

Your Current Organism:

Macrostomum lignano

NCBI taxonomy Id: 282301
Other names: M. lignano

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A267DE46	A0A267E886	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267DE46	A0A267FBM2	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267DE46	A0A267FMF6	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A267DE46	A0A267FUS4	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A267DE46	A0A267GTM6	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A267DW20	A0A267E886	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267DW20	A0A267FBM2	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267DW20	A0A267FMF6	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A267DW20	A0A267FUS4	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A267DW20	A0A267GTM6	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A267E886	A0A267DE46	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267E886	A0A267DW20	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267E886	A0A267FBM2	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A267E886	A0A267FIM6	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267E886	A0A267FMF6	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A267E886	A0A267FUS4	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A267E886	A0A267GTM6	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A267FBM2	A0A267DE46	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267FBM2	A0A267DW20	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A267FBM2	A0A267E886	Uncharacterized protein.	Uncharacterized protein.	0.916