45 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103281581	Uncharacterized protein. (118 aa)
	STRADB	STE20 related adaptor beta. (434 aa)
	PPTC7	Protein phosphatase; Belongs to the PP2C family. (297 aa)
	PDP2	Pyruvate dehyrogenase phosphatase catalytic subunit 2. (543 aa)
	PRKAG2	Protein kinase AMP-activated non-catalytic subunit gamma 2. (327 aa)
	CAB39	Calcium binding protein 39. (341 aa)
	HUNK	Hormonally up-regulated Neu-associated kinase. (696 aa)
	ZBTB21	Zinc finger and BTB domain containing 21. (1043 aa)
	PRKAB1	Protein kinase AMP-activated non-catalytic subunit beta 1. (267 aa)
	UBN2	Ubinuclein 2. (1327 aa)
	PDP1	Pyruvate dehyrogenase phosphatase catalytic subunit 1. (536 aa)
	MYLIP	Myosin regulatory light chain interacting protein. (445 aa)
	LOC100555778	Protein kinase domain-containing protein. (352 aa)
	TSSK3	Testis specific serine kinase 3. (268 aa)
	JADE1	Jade family PHD finger 1. (883 aa)
	PACC1	Proton activated chloride channel 1. (347 aa)
	LOC100555783	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (271 aa)
	PRKAA2	Non-specific serine/threonine protein kinase. (565 aa)
	OBSCN	Obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF. (5554 aa)
	BCKDK	Protein-serine/threonine kinase. (414 aa)
	CAMKK1	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily. (259 aa)
	PRKAG1	Protein kinase AMP-activated non-catalytic subunit gamma 1. (330 aa)
	PRKAA1	Non-specific serine/threonine protein kinase. (550 aa)
	PDPR	Pyruvate dehydrogenase phosphatase regulatory subunit. (879 aa)
	LOC100566337	PPM-type phosphatase domain-containing protein. (412 aa)
	LARP1B	La ribonucleoprotein domain family member 1B. (975 aa)
	HDHD5	Haloacid dehalogenase like hydrolase domain containing 5. (436 aa)
	STRADA	STE20 related adaptor alpha. (431 aa)
	MAP3K15	Mitogen-activated protein kinase kinase kinase 15. (1228 aa)
	PPM1K	Protein phosphatase, Mg2+/Mn2+ dependent 1K. (371 aa)
	PRKAG3	Protein kinase AMP-activated non-catalytic subunit gamma 3. (340 aa)
	LOC103277518	Uncharacterized protein. (381 aa)
	PRKAB2	Protein kinase AMP-activated non-catalytic subunit beta 2. (274 aa)
	STK16	Serine/threonine kinase 16. (307 aa)
	LOC103279985	Uncharacterized protein. (204 aa)
	STK11	Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (447 aa)
	SSBP3	Single stranded DNA binding protein 3. (365 aa)
	PPM1A	Protein phosphatase, Mg2+/Mn2+ dependent 1A. (382 aa)
	LOC100552424	Calmodulin. (149 aa)
	PIM1	Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily. (313 aa)
	DMGDH	Dimethylglycine dehydrogenase. (837 aa)
	LOC100555978	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (275 aa)
	LOC100557058	Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily. (305 aa)
	TSSK2	Testis specific serine kinase 2; Belongs to the protein kinase superfamily. (321 aa)
	H9GVJ4_ANOCA	Uncharacterized protein. (336 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCKDK	PPM1K	ENSACAP00000006857	ENSACAP00000012667	Protein-serine/threonine kinase.	Protein phosphatase, Mg2+/Mn2+ dependent 1K.	0.446
CAB39	PRKAA1	ENSACAP00000002592	ENSACAP00000010079	Calcium binding protein 39.	Non-specific serine/threonine protein kinase.	0.961
CAB39	PRKAA2	ENSACAP00000002592	ENSACAP00000006688	Calcium binding protein 39.	Non-specific serine/threonine protein kinase.	0.964
CAB39	PRKAB1	ENSACAP00000002592	ENSACAP00000003321	Calcium binding protein 39.	Protein kinase AMP-activated non-catalytic subunit beta 1.	0.539
CAB39	PRKAB2	ENSACAP00000002592	ENSACAP00000012971	Calcium binding protein 39.	Protein kinase AMP-activated non-catalytic subunit beta 2.	0.493
CAB39	STK11	ENSACAP00000002592	ENSACAP00000013770	Calcium binding protein 39.	Serine/threonine kinase 11; Belongs to the protein kinase superfamily.	0.995
CAB39	STRADA	ENSACAP00000002592	ENSACAP00000012220	Calcium binding protein 39.	STE20 related adaptor alpha.	0.957
CAB39	STRADB	ENSACAP00000002592	ENSACAP00000001296	Calcium binding protein 39.	STE20 related adaptor beta.	0.957
CAMKK1	JADE1	ENSACAP00000007055	ENSACAP00000006214	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Jade family PHD finger 1.	0.695
CAMKK1	LARP1B	ENSACAP00000007055	ENSACAP00000011166	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	La ribonucleoprotein domain family member 1B.	0.632
CAMKK1	LOC100552424	ENSACAP00000007055	ENSACAP00000015444	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Calmodulin.	0.583
CAMKK1	LOC103281581	ENSACAP00000007055	ENSACAP00000001280	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.917
CAMKK1	PACC1	ENSACAP00000007055	ENSACAP00000006252	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Proton activated chloride channel 1.	0.753
CAMKK1	PRKAB1	ENSACAP00000007055	ENSACAP00000003321	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Protein kinase AMP-activated non-catalytic subunit beta 1.	0.496
CAMKK1	PRKAB2	ENSACAP00000007055	ENSACAP00000012971	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Protein kinase AMP-activated non-catalytic subunit beta 2.	0.496
CAMKK1	PRKAG1	ENSACAP00000007055	ENSACAP00000008018	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Protein kinase AMP-activated non-catalytic subunit gamma 1.	0.512
CAMKK1	PRKAG2	ENSACAP00000007055	ENSACAP00000002374	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Protein kinase AMP-activated non-catalytic subunit gamma 2.	0.512
CAMKK1	PRKAG3	ENSACAP00000007055	ENSACAP00000012696	Calcium/calmodulin dependent protein kinase kinase 1; Belongs to the protein kinase superfamily.	Protein kinase AMP-activated non-catalytic subunit gamma 3.	0.512
DMGDH	MYLIP	ENSACAP00000016558	ENSACAP00000003730	Dimethylglycine dehydrogenase.	Myosin regulatory light chain interacting protein.	0.751
DMGDH	PDP1	ENSACAP00000016558	ENSACAP00000003434	Dimethylglycine dehydrogenase.	Pyruvate dehyrogenase phosphatase catalytic subunit 1.	0.505