STRINGSTRING
TPR TPR NUP153 NUP153 LOC107982271 LOC107982271 NUP98 NUP98 NUP50 NUP50 RAE1 RAE1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TPRTranslocated promoter region, nuclear basket protein. (2366 aa)
NUP153Nucleoporin 153. (1427 aa)
LOC107982271Uncharacterized protein. (178 aa)
NUP98Nucleoporin 98. (1201 aa)
NUP50Nucleoporin 50. (515 aa)
RAE1Ribonucleic acid export 1. (369 aa)
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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