14 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POLR2K	RNA polymerase II subunit K. (58 aa)
	POLR2F	RNA polymerase II subunit F. (127 aa)
	POLR2A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1969 aa)
	polr2c	RPOLD domain-containing protein. (275 aa)
	POLR2D	RNA polymerase II subunit D. (142 aa)
	POLR2G	RNA polymerase II subunit G. (172 aa)
	polr2j	RNA polymerase II subunit J. (117 aa)
	H9GVV6_ANOCA	Uncharacterized protein. (31 aa)
	G1KZ53_ANOCA	Uncharacterized protein. (236 aa)
	H9GUD4_ANOCA	RPOLD domain-containing protein. (210 aa)
	POLR2H	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	POLR2M	RNA polymerase II subunit M. (339 aa)
	POLR2B	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
	POLR2L	RNA polymerase II subunit L. (67 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1KZ53_ANOCA	H9GUD4_ANOCA	ENSACAP00000021411	ENSACAP00000020640	Uncharacterized protein.	RPOLD domain-containing protein.	0.907
G1KZ53_ANOCA	H9GVV6_ANOCA	ENSACAP00000021411	ENSACAP00000021567	Uncharacterized protein.	Uncharacterized protein.	0.965
G1KZ53_ANOCA	POLR2B	ENSACAP00000021411	ENSACAP00000002204	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.973
G1KZ53_ANOCA	POLR2D	ENSACAP00000021411	ENSACAP00000005129	Uncharacterized protein.	RNA polymerase II subunit D.	0.965
G1KZ53_ANOCA	POLR2F	ENSACAP00000021411	ENSACAP00000015030	Uncharacterized protein.	RNA polymerase II subunit F.	0.965
G1KZ53_ANOCA	POLR2G	ENSACAP00000021411	ENSACAP00000000941	Uncharacterized protein.	RNA polymerase II subunit G.	0.965
G1KZ53_ANOCA	POLR2H	ENSACAP00000021411	ENSACAP00000002728	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.965
G1KZ53_ANOCA	POLR2K	ENSACAP00000021411	ENSACAP00000017962	Uncharacterized protein.	RNA polymerase II subunit K.	0.965
G1KZ53_ANOCA	POLR2L	ENSACAP00000021411	ENSACAP00000015241	Uncharacterized protein.	RNA polymerase II subunit L.	0.965
G1KZ53_ANOCA	POLR2M	ENSACAP00000021411	ENSACAP00000018216	Uncharacterized protein.	RNA polymerase II subunit M.	0.547
G1KZ53_ANOCA	polr2c	ENSACAP00000021411	ENSACAP00000007391	Uncharacterized protein.	RPOLD domain-containing protein.	0.907
G1KZ53_ANOCA	polr2j	ENSACAP00000021411	ENSACAP00000000232	Uncharacterized protein.	RNA polymerase II subunit J.	0.965
H9GUD4_ANOCA	G1KZ53_ANOCA	ENSACAP00000020640	ENSACAP00000021411	RPOLD domain-containing protein.	Uncharacterized protein.	0.907
H9GUD4_ANOCA	H9GVV6_ANOCA	ENSACAP00000020640	ENSACAP00000021567	RPOLD domain-containing protein.	Uncharacterized protein.	0.976
H9GUD4_ANOCA	POLR2A	ENSACAP00000020640	ENSACAP00000014487	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.962
H9GUD4_ANOCA	POLR2B	ENSACAP00000020640	ENSACAP00000002204	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.982
H9GUD4_ANOCA	POLR2D	ENSACAP00000020640	ENSACAP00000005129	RPOLD domain-containing protein.	RNA polymerase II subunit D.	0.965
H9GUD4_ANOCA	POLR2F	ENSACAP00000020640	ENSACAP00000015030	RPOLD domain-containing protein.	RNA polymerase II subunit F.	0.989
H9GUD4_ANOCA	POLR2G	ENSACAP00000020640	ENSACAP00000000941	RPOLD domain-containing protein.	RNA polymerase II subunit G.	0.967
H9GUD4_ANOCA	POLR2H	ENSACAP00000020640	ENSACAP00000002728	RPOLD domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.974