(12 nodes) Regulation of triglyceride biosynthetic process network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CTDNEP1	CTD nuclear envelope phosphatase 1. (245 aa)
	LPIN1	Lipin 1. (937 aa)
	SLC27A1	Solute carrier family 27 member 1. (646 aa)
	LOC100567607	Uncharacterized protein. (138 aa)
	SCARB1	Scavenger receptor class B member 1; Belongs to the CD36 family. (539 aa)
	FITM2	Fat storage inducing transmembrane protein 2. (263 aa)
	NR1H2	Nuclear receptor subfamily 1 group H member 2. (436 aa)
	Cnep1r1	Uncharacterized protein. (120 aa)
	GPLD1	Glycosylphosphatidylinositol specific phospholipase D1. (836 aa)
	NR1H3	Nuclear receptor subfamily 1 group H member 3. (408 aa)
	MFSD2A	Major facilitator superfamily domain containing 2A. (534 aa)
	LOC100565255	Uncharacterized protein. (126 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTDNEP1	Cnep1r1	ENSACAP00000001009	ENSACAP00000001371	CTD nuclear envelope phosphatase 1.	Uncharacterized protein.	0.946
CTDNEP1	LPIN1	ENSACAP00000001009	ENSACAP00000000317	CTD nuclear envelope phosphatase 1.	Lipin 1.	0.853
Cnep1r1	CTDNEP1	ENSACAP00000001371	ENSACAP00000001009	Uncharacterized protein.	CTD nuclear envelope phosphatase 1.	0.946
Cnep1r1	LPIN1	ENSACAP00000001371	ENSACAP00000000317	Uncharacterized protein.	Lipin 1.	0.608
LPIN1	CTDNEP1	ENSACAP00000000317	ENSACAP00000001009	Lipin 1.	CTD nuclear envelope phosphatase 1.	0.853
LPIN1	Cnep1r1	ENSACAP00000000317	ENSACAP00000001371	Lipin 1.	Uncharacterized protein.	0.608
SCARB1	SLC27A1	ENSACAP00000014578	ENSACAP00000004865	Scavenger receptor class B member 1; Belongs to the CD36 family.	Solute carrier family 27 member 1.	0.534
SLC27A1	SCARB1	ENSACAP00000004865	ENSACAP00000014578	Solute carrier family 27 member 1.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.534