(13 nodes) Protein polyglutamylation network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TTLL6	Tubulin tyrosine ligase like 6. (463 aa)
	TTLL7	Tubulin tyrosine ligase like 7. (900 aa)
	CEP41	Centrosomal protein 41. (377 aa)
	LRRC58	Leucine rich repeat containing 58. (291 aa)
	TTLL11	Tubulin tyrosine ligase like 11. (448 aa)
	Cfap20	DUF667 domain-containing protein. (38 aa)
	TTLL4	Tubulin tyrosine ligase like 4. (1139 aa)
	TTLL1	Tubulin tyrosine ligase like 1. (383 aa)
	ttll5	Uncharacterized protein. (1300 aa)
	TTLL9	Tubulin tyrosine ligase like 9. (452 aa)
	TTLL2	Tubulin tyrosine ligase like 2. (574 aa)
	TPGS2	Tubulin polyglutamylase complex subunit 2. (294 aa)
	LOC100566462	Uncharacterized protein. (633 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP41	LOC100566462	ENSACAP00000000921	ENSACAP00000007052	Centrosomal protein 41.	Uncharacterized protein.	0.452
CEP41	TTLL1	ENSACAP00000000921	ENSACAP00000015641	Centrosomal protein 41.	Tubulin tyrosine ligase like 1.	0.502
CEP41	TTLL6	ENSACAP00000000921	ENSACAP00000006247	Centrosomal protein 41.	Tubulin tyrosine ligase like 6.	0.452
LOC100566462	CEP41	ENSACAP00000007052	ENSACAP00000000921	Uncharacterized protein.	Centrosomal protein 41.	0.452
TPGS2	TTLL1	ENSACAP00000012250	ENSACAP00000015641	Tubulin polyglutamylase complex subunit 2.	Tubulin tyrosine ligase like 1.	0.779
TTLL1	CEP41	ENSACAP00000015641	ENSACAP00000000921	Tubulin tyrosine ligase like 1.	Centrosomal protein 41.	0.502
TTLL1	TPGS2	ENSACAP00000015641	ENSACAP00000012250	Tubulin tyrosine ligase like 1.	Tubulin polyglutamylase complex subunit 2.	0.779
TTLL1	TTLL11	ENSACAP00000015641	ENSACAP00000007246	Tubulin tyrosine ligase like 1.	Tubulin tyrosine ligase like 11.	0.489
TTLL1	TTLL4	ENSACAP00000015641	ENSACAP00000012729	Tubulin tyrosine ligase like 1.	Tubulin tyrosine ligase like 4.	0.411
TTLL1	ttll5	ENSACAP00000015641	ENSACAP00000016738	Tubulin tyrosine ligase like 1.	Uncharacterized protein.	0.499
TTLL11	TTLL1	ENSACAP00000007246	ENSACAP00000015641	Tubulin tyrosine ligase like 11.	Tubulin tyrosine ligase like 1.	0.489
TTLL11	TTLL9	ENSACAP00000007246	ENSACAP00000016758	Tubulin tyrosine ligase like 11.	Tubulin tyrosine ligase like 9.	0.420
TTLL11	ttll5	ENSACAP00000007246	ENSACAP00000016738	Tubulin tyrosine ligase like 11.	Uncharacterized protein.	0.578
TTLL4	TTLL1	ENSACAP00000012729	ENSACAP00000015641	Tubulin tyrosine ligase like 4.	Tubulin tyrosine ligase like 1.	0.411
TTLL4	ttll5	ENSACAP00000012729	ENSACAP00000016738	Tubulin tyrosine ligase like 4.	Uncharacterized protein.	0.573
TTLL6	CEP41	ENSACAP00000006247	ENSACAP00000000921	Tubulin tyrosine ligase like 6.	Centrosomal protein 41.	0.452
TTLL7	ttll5	ENSACAP00000005797	ENSACAP00000016738	Tubulin tyrosine ligase like 7.	Uncharacterized protein.	0.489
TTLL9	TTLL11	ENSACAP00000016758	ENSACAP00000007246	Tubulin tyrosine ligase like 9.	Tubulin tyrosine ligase like 11.	0.420
TTLL9	ttll5	ENSACAP00000016758	ENSACAP00000016738	Tubulin tyrosine ligase like 9.	Uncharacterized protein.	0.543
ttll5	TTLL1	ENSACAP00000016738	ENSACAP00000015641	Uncharacterized protein.	Tubulin tyrosine ligase like 1.	0.499