(5 nodes) pICln-Sm protein complex network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNRPD2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	SNRPF	Small nuclear ribonucleoprotein polypeptide F. (87 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	SNRPD3	Small nuclear ribonucleoprotein D3 polypeptide. (94 aa)
	CLNS1A	Chloride nucleotide-sensitive channel 1A. (242 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLNS1A	SNRPD1	ENSACAP00000001852	ENSACAP00000006209	Chloride nucleotide-sensitive channel 1A.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.997
CLNS1A	SNRPD2	ENSACAP00000001852	ENSACAP00000016502	Chloride nucleotide-sensitive channel 1A.	Small nuclear ribonucleoprotein Sm D2.	0.943
CLNS1A	SNRPD3	ENSACAP00000001852	ENSACAP00000003218	Chloride nucleotide-sensitive channel 1A.	Small nuclear ribonucleoprotein D3 polypeptide.	0.950
CLNS1A	SNRPF	ENSACAP00000001852	ENSACAP00000013798	Chloride nucleotide-sensitive channel 1A.	Small nuclear ribonucleoprotein polypeptide F.	0.847
SNRPD1	CLNS1A	ENSACAP00000006209	ENSACAP00000001852	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Chloride nucleotide-sensitive channel 1A.	0.997
SNRPD1	SNRPD2	ENSACAP00000006209	ENSACAP00000016502	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
SNRPD1	SNRPD3	ENSACAP00000006209	ENSACAP00000003218	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein D3 polypeptide.	0.999
SNRPD1	SNRPF	ENSACAP00000006209	ENSACAP00000013798	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein polypeptide F.	0.999
SNRPD2	CLNS1A	ENSACAP00000016502	ENSACAP00000001852	Small nuclear ribonucleoprotein Sm D2.	Chloride nucleotide-sensitive channel 1A.	0.943
SNRPD2	SNRPD1	ENSACAP00000016502	ENSACAP00000006209	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
SNRPD2	SNRPD3	ENSACAP00000016502	ENSACAP00000003218	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein D3 polypeptide.	0.999
SNRPD2	SNRPF	ENSACAP00000016502	ENSACAP00000013798	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide F.	0.999
SNRPD3	CLNS1A	ENSACAP00000003218	ENSACAP00000001852	Small nuclear ribonucleoprotein D3 polypeptide.	Chloride nucleotide-sensitive channel 1A.	0.950
SNRPD3	SNRPD1	ENSACAP00000003218	ENSACAP00000006209	Small nuclear ribonucleoprotein D3 polypeptide.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
SNRPD3	SNRPD2	ENSACAP00000003218	ENSACAP00000016502	Small nuclear ribonucleoprotein D3 polypeptide.	Small nuclear ribonucleoprotein Sm D2.	0.999
SNRPD3	SNRPF	ENSACAP00000003218	ENSACAP00000013798	Small nuclear ribonucleoprotein D3 polypeptide.	Small nuclear ribonucleoprotein polypeptide F.	0.999
SNRPF	CLNS1A	ENSACAP00000013798	ENSACAP00000001852	Small nuclear ribonucleoprotein polypeptide F.	Chloride nucleotide-sensitive channel 1A.	0.847
SNRPF	SNRPD1	ENSACAP00000013798	ENSACAP00000006209	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
SNRPF	SNRPD2	ENSACAP00000013798	ENSACAP00000016502	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
SNRPF	SNRPD3	ENSACAP00000013798	ENSACAP00000003218	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein D3 polypeptide.	0.999