(5 nodes) Nuclear pore inner ring network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H9GTP0_ANOCA	Nucleoporin_N domain-containing protein. (572 aa)
	nup188	Uncharacterized protein. (516 aa)
	LOC100555044	Nucleoporin_N domain-containing protein. (631 aa)
	NUP205	Nucleoporin 205. (2013 aa)
	H9GQI4_ANOCA	Nucleoporin_C domain-containing protein. (498 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H9GQI4_ANOCA	H9GTP0_ANOCA	ENSACAP00000018210	ENSACAP00000020220	Nucleoporin_C domain-containing protein.	Nucleoporin_N domain-containing protein.	0.975
H9GQI4_ANOCA	LOC100555044	ENSACAP00000018210	ENSACAP00000009553	Nucleoporin_C domain-containing protein.	Nucleoporin_N domain-containing protein.	0.942
H9GQI4_ANOCA	NUP205	ENSACAP00000018210	ENSACAP00000011330	Nucleoporin_C domain-containing protein.	Nucleoporin 205.	0.981
H9GQI4_ANOCA	nup188	ENSACAP00000018210	ENSACAP00000021286	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.921
H9GTP0_ANOCA	H9GQI4_ANOCA	ENSACAP00000020220	ENSACAP00000018210	Nucleoporin_N domain-containing protein.	Nucleoporin_C domain-containing protein.	0.975
H9GTP0_ANOCA	LOC100555044	ENSACAP00000020220	ENSACAP00000009553	Nucleoporin_N domain-containing protein.	Nucleoporin_N domain-containing protein.	0.557
H9GTP0_ANOCA	NUP205	ENSACAP00000020220	ENSACAP00000011330	Nucleoporin_N domain-containing protein.	Nucleoporin 205.	0.981
H9GTP0_ANOCA	nup188	ENSACAP00000020220	ENSACAP00000021286	Nucleoporin_N domain-containing protein.	Uncharacterized protein.	0.921
LOC100555044	H9GQI4_ANOCA	ENSACAP00000009553	ENSACAP00000018210	Nucleoporin_N domain-containing protein.	Nucleoporin_C domain-containing protein.	0.942
LOC100555044	H9GTP0_ANOCA	ENSACAP00000009553	ENSACAP00000020220	Nucleoporin_N domain-containing protein.	Nucleoporin_N domain-containing protein.	0.557
LOC100555044	NUP205	ENSACAP00000009553	ENSACAP00000011330	Nucleoporin_N domain-containing protein.	Nucleoporin 205.	0.995
LOC100555044	nup188	ENSACAP00000009553	ENSACAP00000021286	Nucleoporin_N domain-containing protein.	Uncharacterized protein.	0.921
NUP205	H9GQI4_ANOCA	ENSACAP00000011330	ENSACAP00000018210	Nucleoporin 205.	Nucleoporin_C domain-containing protein.	0.981
NUP205	H9GTP0_ANOCA	ENSACAP00000011330	ENSACAP00000020220	Nucleoporin 205.	Nucleoporin_N domain-containing protein.	0.981
NUP205	LOC100555044	ENSACAP00000011330	ENSACAP00000009553	Nucleoporin 205.	Nucleoporin_N domain-containing protein.	0.995
NUP205	nup188	ENSACAP00000011330	ENSACAP00000021286	Nucleoporin 205.	Uncharacterized protein.	0.992
nup188	H9GQI4_ANOCA	ENSACAP00000021286	ENSACAP00000018210	Uncharacterized protein.	Nucleoporin_C domain-containing protein.	0.921
nup188	H9GTP0_ANOCA	ENSACAP00000021286	ENSACAP00000020220	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.921
nup188	LOC100555044	ENSACAP00000021286	ENSACAP00000009553	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.921
nup188	NUP205	ENSACAP00000021286	ENSACAP00000011330	Uncharacterized protein.	Nucleoporin 205.	0.992