23 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IMPACT	Impact RWD domain protein. (318 aa)
	POLR2G	RNA polymerase II subunit G. (172 aa)
	DNAJC3	DnaJ heat shock protein family (Hsp40) member C3. (503 aa)
	METTL3	Methyltransferase like 3; Belongs to the MT-A70-like family. (569 aa)
	LARP1	La ribonucleoprotein domain family member 1. (976 aa)
	POLR2D	RNA polymerase II subunit D. (142 aa)
	YTHDF1	YTH N6-methyladenosine RNA binding protein 1. (560 aa)
	LOC100561800	Protein kinase domain-containing protein. (252 aa)
	dazl	RRM domain-containing protein. (301 aa)
	RPS6KB2	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (528 aa)
	BOLL	Boule homolog, RNA binding protein. (317 aa)
	EIF2B5	Eukaryotic translation initiation factor 2B subunit epsilon. (706 aa)
	YTHDF2	YTH N6-methyladenosine RNA binding protein 2. (581 aa)
	KHDRBS1	KH RNA binding domain containing, signal transduction associated 1. (351 aa)
	HABP4	Hyaluronan binding protein 4. (398 aa)
	rps6kb1	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (503 aa)
	EIF2AK4	Eukaryotic translation initiation factor 2 alpha kinase 4. (1647 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1370 aa)
	YTHDF3	YTH N6-methyladenosine RNA binding protein 3. (583 aa)
	LOC100557435	Uncharacterized protein. (493 aa)
	LOC100561101	TNF_2 domain-containing protein. (234 aa)
	H9GSU7_ANOCA	RRM domain-containing protein. (392 aa)
	LOC103278072	TNF_2 domain-containing protein. (239 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOLL	POLR2D	ENSACAP00000009167	ENSACAP00000005129	Boule homolog, RNA binding protein.	RNA polymerase II subunit D.	0.411
EIF2AK4	EIF2B5	ENSACAP00000014325	ENSACAP00000010565	Eukaryotic translation initiation factor 2 alpha kinase 4.	Eukaryotic translation initiation factor 2B subunit epsilon.	0.699
EIF2AK4	IMPACT	ENSACAP00000014325	ENSACAP00000001682	Eukaryotic translation initiation factor 2 alpha kinase 4.	Impact RWD domain protein.	0.455
EIF2B5	EIF2AK4	ENSACAP00000010565	ENSACAP00000014325	Eukaryotic translation initiation factor 2B subunit epsilon.	Eukaryotic translation initiation factor 2 alpha kinase 4.	0.699
IMPACT	EIF2AK4	ENSACAP00000001682	ENSACAP00000014325	Impact RWD domain protein.	Eukaryotic translation initiation factor 2 alpha kinase 4.	0.455
LOC100561101	LOC103278072	ENSACAP00000018201	ENSACAP00000022717	TNF_2 domain-containing protein.	TNF_2 domain-containing protein.	0.900
LOC103278072	LOC100561101	ENSACAP00000022717	ENSACAP00000018201	TNF_2 domain-containing protein.	TNF_2 domain-containing protein.	0.900
METTL3	POLR2G	ENSACAP00000002807	ENSACAP00000000941	Methyltransferase like 3; Belongs to the MT-A70-like family.	RNA polymerase II subunit G.	0.593
METTL3	YTHDF1	ENSACAP00000002807	ENSACAP00000005432	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N6-methyladenosine RNA binding protein 1.	0.658
METTL3	YTHDF2	ENSACAP00000002807	ENSACAP00000010650	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N6-methyladenosine RNA binding protein 2.	0.574
METTL3	YTHDF3	ENSACAP00000002807	ENSACAP00000016581	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N6-methyladenosine RNA binding protein 3.	0.560
POLR2D	BOLL	ENSACAP00000005129	ENSACAP00000009167	RNA polymerase II subunit D.	Boule homolog, RNA binding protein.	0.411
POLR2D	POLR2G	ENSACAP00000005129	ENSACAP00000000941	RNA polymerase II subunit D.	RNA polymerase II subunit G.	0.999
POLR2D	dazl	ENSACAP00000005129	ENSACAP00000007660	RNA polymerase II subunit D.	RRM domain-containing protein.	0.411
POLR2G	METTL3	ENSACAP00000000941	ENSACAP00000002807	RNA polymerase II subunit G.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.593
POLR2G	POLR2D	ENSACAP00000000941	ENSACAP00000005129	RNA polymerase II subunit G.	RNA polymerase II subunit D.	0.999
RPS6KB2	rps6kb1	ENSACAP00000008180	ENSACAP00000012793	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	0.901
YTHDF1	METTL3	ENSACAP00000005432	ENSACAP00000002807	YTH N6-methyladenosine RNA binding protein 1.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.658
YTHDF1	YTHDF2	ENSACAP00000005432	ENSACAP00000010650	YTH N6-methyladenosine RNA binding protein 1.	YTH N6-methyladenosine RNA binding protein 2.	0.408
YTHDF2	METTL3	ENSACAP00000010650	ENSACAP00000002807	YTH N6-methyladenosine RNA binding protein 2.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.574