STRINGSTRING
VTA1 VTA1 mvb12a mvb12a vps4a vps4a TSG101 TSG101 LOC100562825 LOC100562825 CHMP5 CHMP5 LRSAM1 LRSAM1 VPS4B VPS4B CHMP6 CHMP6 pdcd6ip pdcd6ip MVB12B MVB12B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VTA1Vesicle trafficking 1. (305 aa)
mvb12aUncharacterized protein. (264 aa)
vps4aUncharacterized protein; Belongs to the AAA ATPase family. (437 aa)
TSG101Tumor susceptibility 101. (392 aa)
LOC100562825Uncharacterized protein. (286 aa)
CHMP5Charged multivesicular body protein 5. (219 aa)
LRSAM1Leucine rich repeat and sterile alpha motif containing 1. (720 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (442 aa)
CHMP6Charged multivesicular body protein 6. (200 aa)
pdcd6ipBRO1 domain-containing protein. (869 aa)
MVB12BMultivesicular body subunit 12B. (140 aa)
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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