44 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC30A8	Solute carrier family 30 member 8. (381 aa)
	SLC16A10	Solute carrier family 16 member 10. (394 aa)
	NIBAN2	Niban apoptosis regulator 2. (771 aa)
	ANXA1	Annexin. (342 aa)
	H9GK66_ANOCA	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (83 aa)
	TMF1	TATA element modulatory factor 1. (1098 aa)
	LOC100563939	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (360 aa)
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	PCLO	Piccolo presynaptic cytomatrix protein. (5189 aa)
	GHSR	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family. (359 aa)
	Rab44	Uncharacterized protein. (289 aa)
	G1KSX1_ANOCA	Uncharacterized protein. (189 aa)
	PARK7	Parkinsonism associated deglycase. (189 aa)
	INHBA	Inhibin subunit beta A. (422 aa)
	SNX19	Sorting nexin 19. (999 aa)
	LYN	Tyrosine-protein kinase. (514 aa)
	KCNQ1	Potassium voltage-gated channel subfamily Q member 1; Belongs to the potassium channel family. (707 aa)
	CPLX3	Complexin 3. (74 aa)
	GLP1R	Glucagon like peptide 1 receptor; Belongs to the G-protein coupled receptor 2 family. (490 aa)
	SLC16A2	Solute carrier family 16 member 2. (407 aa)
	FZD4	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (526 aa)
	CYB5R4	Cytochrome b5 reductase 4. (524 aa)
	LOC100564878	Uncharacterized protein; Belongs to the potassium channel family. (632 aa)
	VIP	Vasoactive intestinal peptide. (201 aa)
	aqp1	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (256 aa)
	STXBP3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (600 aa)
	GHRHR	Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family. (435 aa)
	RAPGEF4	Rap guanine nucleotide exchange factor 4. (817 aa)
	HNF1B	HNF1 homeobox B. (465 aa)
	ffar4	G_PROTEIN_RECEP_F1_2 domain-containing protein. (368 aa)
	LOC100558713	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (189 aa)
	SELENOT	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (146 aa)
	LOC103278186	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (341 aa)
	EDN1	Endothelin 1. (209 aa)
	ADCYAP1	Adenylate cyclase activating polypeptide 1. (172 aa)
	GPR119	G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family. (330 aa)
	GATA3	GATA binding protein 3. (365 aa)
	CREB1	cAMP responsive element binding protein 1. (349 aa)
	G1KJC7_ANOCA	Uncharacterized protein. (209 aa)
	CCDC186	Coiled-coil domain containing 186. (906 aa)
	SELENOM	Selenoprotein M. (98 aa)
	FFAR1	Free fatty acid receptor 1. (293 aa)
	RAB11FIP2	RAB11 family interacting protein 2. (512 aa)
	G1KK27_ANOCA	MFS domain-containing protein. (406 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADCYAP1	GHRHR	ENSACAP00000008538	ENSACAP00000005977	Adenylate cyclase activating polypeptide 1.	Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family.	0.780
ADCYAP1	GLP1R	ENSACAP00000008538	ENSACAP00000001897	Adenylate cyclase activating polypeptide 1.	Glucagon like peptide 1 receptor; Belongs to the G-protein coupled receptor 2 family.	0.631
CCDC186	TMF1	ENSACAP00000009780	ENSACAP00000015003	Coiled-coil domain containing 186.	TATA element modulatory factor 1.	0.450
CPLX3	G1KJC7_ANOCA	ENSACAP00000020357	ENSACAP00000009611	Complexin 3.	Uncharacterized protein.	0.593
CPLX3	snap23	ENSACAP00000020357	ENSACAP00000015440	Complexin 3.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.593
CREB1	GATA3	ENSACAP00000009515	ENSACAP00000008932	cAMP responsive element binding protein 1.	GATA binding protein 3.	0.411
CYB5R4	GATA3	ENSACAP00000003882	ENSACAP00000008932	Cytochrome b5 reductase 4.	GATA binding protein 3.	0.402
EDN1	GHSR	ENSACAP00000008302	ENSACAP00000016116	Endothelin 1.	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	0.417
FFAR1	SLC30A8	ENSACAP00000010076	ENSACAP00000010676	Free fatty acid receptor 1.	Solute carrier family 30 member 8.	0.434
FFAR1	ffar4	ENSACAP00000010076	ENSACAP00000006875	Free fatty acid receptor 1.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.592
G1KJC7_ANOCA	CPLX3	ENSACAP00000009611	ENSACAP00000020357	Uncharacterized protein.	Complexin 3.	0.593
G1KJC7_ANOCA	STXBP3	ENSACAP00000009611	ENSACAP00000005833	Uncharacterized protein.	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.696
G1KJC7_ANOCA	snap23	ENSACAP00000009611	ENSACAP00000015440	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.558
G1KSX1_ANOCA	Rab44	ENSACAP00000016397	ENSACAP00000016372	Uncharacterized protein.	Uncharacterized protein.	0.899
GATA3	CREB1	ENSACAP00000008932	ENSACAP00000009515	GATA binding protein 3.	cAMP responsive element binding protein 1.	0.411
GATA3	CYB5R4	ENSACAP00000008932	ENSACAP00000003882	GATA binding protein 3.	Cytochrome b5 reductase 4.	0.402
GHRHR	ADCYAP1	ENSACAP00000005977	ENSACAP00000008538	Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family.	Adenylate cyclase activating polypeptide 1.	0.780
GHRHR	GHSR	ENSACAP00000005977	ENSACAP00000016116	Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family.	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	0.546
GHRHR	VIP	ENSACAP00000005977	ENSACAP00000005491	Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family.	Vasoactive intestinal peptide.	0.606
GHSR	EDN1	ENSACAP00000016116	ENSACAP00000008302	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	Endothelin 1.	0.417