(11 nodes) Protein heterotetramerization network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NUDT21	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
	H9GEX9_ANOCA	Uncharacterized protein. (3670 aa)
	PKD2	Polycystin 2, transient receptor potential cation channel. (873 aa)
	CBR4	Carbonyl reductase 4. (244 aa)
	FARSA	Phenylalanyl-tRNA synthetase subunit alpha. (594 aa)
	CPSF6	Cleavage and polyadenylation specific factor 6. (541 aa)
	LOC103282539	Uncharacterized protein. (227 aa)
	H9GVG2_ANOCA	Uncharacterized protein. (589 aa)
	RRM1	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (798 aa)
	FARSB	Phenylalanyl-tRNA synthetase subunit beta. (600 aa)
	Pkd1	Uncharacterized protein. (816 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF6	NUDT21	ENSACAP00000017461	ENSACAP00000007190	Cleavage and polyadenylation specific factor 6.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.996
FARSA	FARSB	ENSACAP00000016904	ENSACAP00000004827	Phenylalanyl-tRNA synthetase subunit alpha.	Phenylalanyl-tRNA synthetase subunit beta.	0.999
FARSB	FARSA	ENSACAP00000004827	ENSACAP00000016904	Phenylalanyl-tRNA synthetase subunit beta.	Phenylalanyl-tRNA synthetase subunit alpha.	0.999
H9GEX9_ANOCA	LOC103282539	ENSACAP00000009036	ENSACAP00000020963	Uncharacterized protein.	Uncharacterized protein.	0.540
H9GEX9_ANOCA	PKD2	ENSACAP00000009036	ENSACAP00000012547	Uncharacterized protein.	Polycystin 2, transient receptor potential cation channel.	0.885
H9GVG2_ANOCA	LOC103282539	ENSACAP00000021324	ENSACAP00000020963	Uncharacterized protein.	Uncharacterized protein.	0.951
H9GVG2_ANOCA	PKD2	ENSACAP00000021324	ENSACAP00000012547	Uncharacterized protein.	Polycystin 2, transient receptor potential cation channel.	0.843
H9GVG2_ANOCA	Pkd1	ENSACAP00000021324	ENSACAP00000006945	Uncharacterized protein.	Uncharacterized protein.	0.951
LOC103282539	H9GEX9_ANOCA	ENSACAP00000020963	ENSACAP00000009036	Uncharacterized protein.	Uncharacterized protein.	0.540
LOC103282539	H9GVG2_ANOCA	ENSACAP00000020963	ENSACAP00000021324	Uncharacterized protein.	Uncharacterized protein.	0.951
LOC103282539	PKD2	ENSACAP00000020963	ENSACAP00000012547	Uncharacterized protein.	Polycystin 2, transient receptor potential cation channel.	0.944
LOC103282539	Pkd1	ENSACAP00000020963	ENSACAP00000006945	Uncharacterized protein.	Uncharacterized protein.	0.967
NUDT21	CPSF6	ENSACAP00000007190	ENSACAP00000017461	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specific factor 6.	0.996
PKD2	H9GEX9_ANOCA	ENSACAP00000012547	ENSACAP00000009036	Polycystin 2, transient receptor potential cation channel.	Uncharacterized protein.	0.885
PKD2	H9GVG2_ANOCA	ENSACAP00000012547	ENSACAP00000021324	Polycystin 2, transient receptor potential cation channel.	Uncharacterized protein.	0.843
PKD2	LOC103282539	ENSACAP00000012547	ENSACAP00000020963	Polycystin 2, transient receptor potential cation channel.	Uncharacterized protein.	0.944
PKD2	Pkd1	ENSACAP00000012547	ENSACAP00000006945	Polycystin 2, transient receptor potential cation channel.	Uncharacterized protein.	0.944
Pkd1	H9GVG2_ANOCA	ENSACAP00000006945	ENSACAP00000021324	Uncharacterized protein.	Uncharacterized protein.	0.951
Pkd1	LOC103282539	ENSACAP00000006945	ENSACAP00000020963	Uncharacterized protein.	Uncharacterized protein.	0.967
Pkd1	PKD2	ENSACAP00000006945	ENSACAP00000012547	Uncharacterized protein.	Polycystin 2, transient receptor potential cation channel.	0.944