(7 nodes) G-quadruplex DNA binding network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIF1	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (640 aa)
	rad50	Zinc-hook domain-containing protein. (1312 aa)
	BLM	BLM RecQ like helicase. (1396 aa)
	DHX36	DEAH-box helicase 36. (981 aa)
	XRN1	5'-3' exoribonuclease 1. (1769 aa)
	WRN	WRN RecQ like helicase. (1315 aa)
	DDX11	DEAD/H-box helicase 11. (914 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLM	DDX11	ENSACAP00000014045	ENSACAP00000000038	BLM RecQ like helicase.	DEAD/H-box helicase 11.	0.508
BLM	PIF1	ENSACAP00000014045	ENSACAP00000012946	BLM RecQ like helicase.	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	0.744
BLM	WRN	ENSACAP00000014045	ENSACAP00000003095	BLM RecQ like helicase.	WRN RecQ like helicase.	0.684
BLM	rad50	ENSACAP00000014045	ENSACAP00000012528	BLM RecQ like helicase.	Zinc-hook domain-containing protein.	0.860
DDX11	BLM	ENSACAP00000000038	ENSACAP00000014045	DEAD/H-box helicase 11.	BLM RecQ like helicase.	0.508
DDX11	PIF1	ENSACAP00000000038	ENSACAP00000012946	DEAD/H-box helicase 11.	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	0.616
DDX11	WRN	ENSACAP00000000038	ENSACAP00000003095	DEAD/H-box helicase 11.	WRN RecQ like helicase.	0.982
DDX11	rad50	ENSACAP00000000038	ENSACAP00000012528	DEAD/H-box helicase 11.	Zinc-hook domain-containing protein.	0.515
DHX36	PIF1	ENSACAP00000019490	ENSACAP00000012946	DEAH-box helicase 36.	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	0.476
DHX36	WRN	ENSACAP00000019490	ENSACAP00000003095	DEAH-box helicase 36.	WRN RecQ like helicase.	0.427
PIF1	BLM	ENSACAP00000012946	ENSACAP00000014045	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	BLM RecQ like helicase.	0.744
PIF1	DDX11	ENSACAP00000012946	ENSACAP00000000038	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	DEAD/H-box helicase 11.	0.616
PIF1	DHX36	ENSACAP00000012946	ENSACAP00000019490	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	DEAH-box helicase 36.	0.476
PIF1	WRN	ENSACAP00000012946	ENSACAP00000003095	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	WRN RecQ like helicase.	0.939
PIF1	rad50	ENSACAP00000012946	ENSACAP00000012528	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	Zinc-hook domain-containing protein.	0.831
WRN	BLM	ENSACAP00000003095	ENSACAP00000014045	WRN RecQ like helicase.	BLM RecQ like helicase.	0.684
WRN	DDX11	ENSACAP00000003095	ENSACAP00000000038	WRN RecQ like helicase.	DEAD/H-box helicase 11.	0.982
WRN	DHX36	ENSACAP00000003095	ENSACAP00000019490	WRN RecQ like helicase.	DEAH-box helicase 36.	0.427
WRN	PIF1	ENSACAP00000003095	ENSACAP00000012946	WRN RecQ like helicase.	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.	0.939
WRN	rad50	ENSACAP00000003095	ENSACAP00000012528	WRN RecQ like helicase.	Zinc-hook domain-containing protein.	0.986