13 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZNRD1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (120 aa)
	TWISTNB	TWIST neighbor. (197 aa)
	POLR1A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1704 aa)
	POLR2F	RNA polymerase II subunit F. (127 aa)
	POLI	DNA polymerase iota. (521 aa)
	POLR1D	RNA polymerase I and III subunit D. (116 aa)
	POLR2L	RNA polymerase II subunit L. (67 aa)
	LOC100560345	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (587 aa)
	LOC100563266	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (691 aa)
	POLR2H	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	H9GVV6_ANOCA	Uncharacterized protein. (31 aa)
	POLR2K	RNA polymerase II subunit K. (58 aa)
	POLR1C	RNA polymerase I and III subunit C. (348 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H9GVV6_ANOCA	LOC100560345	ENSACAP00000021567	ENSACAP00000005636	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.977
H9GVV6_ANOCA	LOC100563266	ENSACAP00000021567	ENSACAP00000006993	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.977
H9GVV6_ANOCA	POLR1A	ENSACAP00000021567	ENSACAP00000012126	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
H9GVV6_ANOCA	POLR1C	ENSACAP00000021567	ENSACAP00000009594	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.999
H9GVV6_ANOCA	POLR1D	ENSACAP00000021567	ENSACAP00000015479	Uncharacterized protein.	RNA polymerase I and III subunit D.	0.999
H9GVV6_ANOCA	POLR2F	ENSACAP00000021567	ENSACAP00000015030	Uncharacterized protein.	RNA polymerase II subunit F.	0.999
H9GVV6_ANOCA	POLR2H	ENSACAP00000021567	ENSACAP00000002728	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
H9GVV6_ANOCA	POLR2K	ENSACAP00000021567	ENSACAP00000017962	Uncharacterized protein.	RNA polymerase II subunit K.	0.999
H9GVV6_ANOCA	POLR2L	ENSACAP00000021567	ENSACAP00000015241	Uncharacterized protein.	RNA polymerase II subunit L.	0.999
H9GVV6_ANOCA	TWISTNB	ENSACAP00000021567	ENSACAP00000011549	Uncharacterized protein.	TWIST neighbor.	0.999
H9GVV6_ANOCA	ZNRD1	ENSACAP00000021567	ENSACAP00000011295	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
LOC100560345	H9GVV6_ANOCA	ENSACAP00000005636	ENSACAP00000021567	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	Uncharacterized protein.	0.977
LOC100560345	POLI	ENSACAP00000005636	ENSACAP00000000212	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	DNA polymerase iota.	0.449
LOC100560345	POLR1A	ENSACAP00000005636	ENSACAP00000012126	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
LOC100560345	POLR1C	ENSACAP00000005636	ENSACAP00000009594	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	RNA polymerase I and III subunit C.	0.980
LOC100560345	POLR1D	ENSACAP00000005636	ENSACAP00000015479	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	RNA polymerase I and III subunit D.	0.947
LOC100560345	POLR2F	ENSACAP00000005636	ENSACAP00000015030	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	RNA polymerase II subunit F.	0.978
LOC100560345	POLR2H	ENSACAP00000005636	ENSACAP00000002728	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.962
LOC100560345	POLR2K	ENSACAP00000005636	ENSACAP00000017962	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	RNA polymerase II subunit K.	0.959
LOC100560345	POLR2L	ENSACAP00000005636	ENSACAP00000015241	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	RNA polymerase II subunit L.	0.964