(10 nodes) v-SNARE, coiled-coil homology domain network (Anolis carolinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100556505	V-SNARE coiled-coil homology domain-containing protein. (113 aa)
	VAMP1	Vesicle associated membrane protein 1. (117 aa)
	STXBP5	Syntaxin binding protein 5. (1172 aa)
	YKT6	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (198 aa)
	STXBP5L	Syntaxin binding protein 5 like. (1092 aa)
	vamp2	V-SNARE coiled-coil homology domain-containing protein. (99 aa)
	VAMP7	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (219 aa)
	VAMP4	Vesicle associated membrane protein 4. (88 aa)
	LOC100556109	Uncharacterized protein; Belongs to the synaptobrevin family. (215 aa)
	STXBP6	Syntaxin binding protein 6. (160 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100556109	LOC100556505	ENSACAP00000012186	ENSACAP00000002765	Uncharacterized protein; Belongs to the synaptobrevin family.	V-SNARE coiled-coil homology domain-containing protein.	0.644
LOC100556109	STXBP5	ENSACAP00000012186	ENSACAP00000007076	Uncharacterized protein; Belongs to the synaptobrevin family.	Syntaxin binding protein 5.	0.610
LOC100556109	STXBP5L	ENSACAP00000012186	ENSACAP00000011490	Uncharacterized protein; Belongs to the synaptobrevin family.	Syntaxin binding protein 5 like.	0.610
LOC100556109	VAMP1	ENSACAP00000012186	ENSACAP00000006541	Uncharacterized protein; Belongs to the synaptobrevin family.	Vesicle associated membrane protein 1.	0.644
LOC100556109	VAMP4	ENSACAP00000012186	ENSACAP00000012459	Uncharacterized protein; Belongs to the synaptobrevin family.	Vesicle associated membrane protein 4.	0.689
LOC100556109	VAMP7	ENSACAP00000012186	ENSACAP00000015525	Uncharacterized protein; Belongs to the synaptobrevin family.	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.	0.704
LOC100556109	YKT6	ENSACAP00000012186	ENSACAP00000011732	Uncharacterized protein; Belongs to the synaptobrevin family.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.927
LOC100556109	vamp2	ENSACAP00000012186	ENSACAP00000019166	Uncharacterized protein; Belongs to the synaptobrevin family.	V-SNARE coiled-coil homology domain-containing protein.	0.644
LOC100556505	LOC100556109	ENSACAP00000002765	ENSACAP00000012186	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.644
LOC100556505	STXBP5	ENSACAP00000002765	ENSACAP00000007076	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin binding protein 5.	0.643
LOC100556505	STXBP5L	ENSACAP00000002765	ENSACAP00000011490	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin binding protein 5 like.	0.643
LOC100556505	VAMP1	ENSACAP00000002765	ENSACAP00000006541	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 1.	0.547
LOC100556505	VAMP4	ENSACAP00000002765	ENSACAP00000012459	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 4.	0.876
LOC100556505	VAMP7	ENSACAP00000002765	ENSACAP00000015525	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.	0.794
LOC100556505	YKT6	ENSACAP00000002765	ENSACAP00000011732	V-SNARE coiled-coil homology domain-containing protein.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.458
LOC100556505	vamp2	ENSACAP00000002765	ENSACAP00000019166	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.545
STXBP5	LOC100556109	ENSACAP00000007076	ENSACAP00000012186	Syntaxin binding protein 5.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.610
STXBP5	LOC100556505	ENSACAP00000007076	ENSACAP00000002765	Syntaxin binding protein 5.	V-SNARE coiled-coil homology domain-containing protein.	0.643
STXBP5	STXBP5L	ENSACAP00000007076	ENSACAP00000011490	Syntaxin binding protein 5.	Syntaxin binding protein 5 like.	0.547
STXBP5	VAMP1	ENSACAP00000007076	ENSACAP00000006541	Syntaxin binding protein 5.	Vesicle associated membrane protein 1.	0.643