STRINGSTRING
NUP133 NUP133 LOC103282085 LOC103282085 LOC100557254 LOC100557254 G1KZ53_ANOCA G1KZ53_ANOCA nup188 nup188 LOC103282979 LOC103282979 H9GUD4_ANOCA H9GUD4_ANOCA H9GTP0_ANOCA H9GTP0_ANOCA ENSACAP00000019109 ENSACAP00000019109 ENSACAP00000019009 ENSACAP00000019009 LOC100556861 LOC100556861 H9GQI4_ANOCA H9GQI4_ANOCA POLR2K POLR2K LOC100559083 LOC100559083 NUP37 NUP37 RAE1 RAE1 NUP50 NUP50 POLR2L POLR2L ENSACAP00000015206 ENSACAP00000015206 LOC100558489 LOC100558489 NUP88 NUP88 LOC100558030 LOC100558030 LOC100557833 LOC100557833 POLR2F POLR2F LOC100557042 LOC100557042 SEC13 SEC13 POLR2A POLR2A NUP62 NUP62 NUP98 NUP98 LOC107982271 LOC107982271 NUP42 NUP42 SEH1L SEH1L IPO8 IPO8 NUP210 NUP210 NUP54 NUP54 H2AZ1 H2AZ1 TNRC6A TNRC6A NUP210L NUP210L NUP205 NUP205 LOC100555044 LOC100555044 IPO7 IPO7 NUP160 NUP160 NDC1 NDC1 NUP35 NUP35 NUP93 NUP93 polr2c polr2c RAN RAN NUP43 NUP43 NUP85 NUP85 H2AZ2 H2AZ2 AAAS AAAS POLR2D POLR2D LOC100553870 LOC100553870 LOC100553081 LOC100553081 HIST1H4J HIST1H4J LOC100552683 LOC100552683 NUP153 NUP153 NUP107 NUP107 LOC100556079 LOC100556079 LOC100556472 LOC100556472 POLR2H POLR2H NUP58 NUP58 POLR2B POLR2B RANBP2 RANBP2 TPR TPR POLR2G POLR2G polr2j polr2j AGO2 AGO2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP133Nucleoporin 133. (1144 aa)
LOC103282085Nup214_FG domain-containing protein. (450 aa)
LOC100557254Histone H2B; Belongs to the histone H2B family. (126 aa)
G1KZ53_ANOCAUncharacterized protein. (236 aa)
nup188Uncharacterized protein. (516 aa)
LOC103282979Uncharacterized protein. (145 aa)
H9GUD4_ANOCARPOLD domain-containing protein. (210 aa)
H9GTP0_ANOCANucleoporin_N domain-containing protein. (572 aa)
ENSACAP00000019109annotation not available (103 aa)
ENSACAP00000019009annotation not available (103 aa)
LOC100556861Histone H2B; Belongs to the histone H2B family. (126 aa)
H9GQI4_ANOCANucleoporin_C domain-containing protein. (498 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
LOC100559083Histone H4. (103 aa)
NUP37Nucleoporin 37. (326 aa)
RAE1Ribonucleic acid export 1. (369 aa)
NUP50Nucleoporin 50. (515 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
ENSACAP00000015206annotation not available (103 aa)
LOC100558489Histone H4. (103 aa)
NUP88Nucleoporin 88. (262 aa)
LOC100558030Histone H4. (103 aa)
LOC100557833Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
LOC100557042Histone H2B; Belongs to the histone H2B family. (126 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (363 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1969 aa)
NUP62Nucleoporin 62. (599 aa)
NUP98Nucleoporin 98. (1201 aa)
LOC107982271Uncharacterized protein. (178 aa)
NUP42Nucleoporin 42. (362 aa)
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (324 aa)
IPO8Importin 8. (1042 aa)
NUP210Nucleoporin 210. (1990 aa)
NUP54Nucleoporin 54. (512 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
TNRC6ATrinucleotide repeat containing adaptor 6A. (1931 aa)
NUP210LNucleoporin 210 like. (1888 aa)
NUP205Nucleoporin 205. (2013 aa)
LOC100555044Nucleoporin_N domain-containing protein. (631 aa)
IPO7Importin 7. (1038 aa)
NUP160Nucleoporin 160. (1437 aa)
NDC1NDC1 transmembrane nucleoporin. (670 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (748 aa)
polr2cRPOLD domain-containing protein. (275 aa)
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
NUP43Nucleoporin 43. (391 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (128 aa)
AAASAladin WD repeat nucleoporin. (507 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
LOC100553870Histone H4. (103 aa)
LOC100553081Histone H2B 5-like. (126 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC100552683Histone H2B; Belongs to the histone H2B family. (126 aa)
NUP153Nucleoporin 153. (1427 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1052 aa)
LOC100556079Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC100556472Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
NUP58Nucleoporin 58. (595 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
RANBP2RAN binding protein 2. (2819 aa)
TPRTranslocated promoter region, nuclear basket protein. (2366 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
polr2jRNA polymerase II subunit J. (117 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (870 aa)
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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