STRINGSTRING
POLR2F POLR2F POLR2L POLR2L COPS2 COPS2 COPS5 COPS5 ERCC8 ERCC8 PHF3 PHF3 ZNF830 ZNF830 USP40 USP40 ERCC3 ERCC3 GPS1 GPS1 uvssa uvssa GTF2H1 GTF2H1 polr2j polr2j CUL4A CUL4A PCNA PCNA CCNH CCNH RFC2 RFC2 POLE2 POLE2 POLR2G POLR2G AQR AQR TCEANC TCEANC POLR2B POLR2B PPIE PPIE POLR2H POLR2H LOC107982244 LOC107982244 bivm bivm rps27a rps27a PPP1R42 PPP1R42 CDK7 CDK7 RFC5 RFC5 H9GNG7_ANOCA H9GNG7_ANOCA XAB2 XAB2 DDB1 DDB1 PRPF19 PRPF19 TCEA1 TCEA1 ubc ubc hmgn2 hmgn2 POLR2K POLR2K H9GRS7_ANOCA H9GRS7_ANOCA UBA52 UBA52 ATAD5 ATAD5 H9GT41_ANOCA H9GT41_ANOCA H9GT97_ANOCA H9GT97_ANOCA POLD1 POLD1 LOC100559702 LOC100559702 H9GUD4_ANOCA H9GUD4_ANOCA spocd1 spocd1 G1KZ53_ANOCA G1KZ53_ANOCA H9GVV6_ANOCA H9GVV6_ANOCA ercc1 ercc1 GTF2H3 GTF2H3 POLR2A POLR2A RPA1 RPA1 NRDE2 NRDE2 pold3 pold3 TCEANC2 TCEANC2 RCBTB1 RCBTB1 H9GK63_ANOCA H9GK63_ANOCA isy1 isy1 RPA3 RPA3 cops6 cops6 COPS7B COPS7B POLD2 POLD2 ERCC6 ERCC6 LIG1 LIG1 CUL4B CUL4B COPS4 COPS4 POLE POLE COPS8 COPS8 GTF2H4 GTF2H4 RCBTB2 RCBTB2 ERCC4 ERCC4 RFC3 RFC3 xrcc1 xrcc1 XPA XPA COPS3 COPS3 GTF2H5 GTF2H5 TCEA3 TCEA3 EP300 EP300 RBX1 RBX1 LOC100558064 LOC100558064 POLR2D POLR2D HMGN1 HMGN1 USP7 USP7 COPS7A COPS7A MEIOB MEIOB tcea2 tcea2 MNAT1 MNAT1 polr2c polr2c RFC1 RFC1 RFC4 RFC4 POLK POLK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLR2FRNA polymerase II subunit F. (127 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
COPS2COP9 signalosome subunit 2. (507 aa)
COPS5COP9 signalosome subunit 5. (293 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (354 aa)
PHF3PHD finger protein 3. (2036 aa)
ZNF830Zinc finger protein 830. (376 aa)
USP40Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1234 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (719 aa)
GPS1G protein pathway suppressor 1. (527 aa)
uvssaUncharacterized protein. (735 aa)
GTF2H1General transcription factor IIH subunit 1. (571 aa)
polr2jRNA polymerase II subunit J. (117 aa)
CUL4ACullin 4A; Belongs to the cullin family. (765 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
CCNHCyclin H; Belongs to the cyclin family. (318 aa)
RFC2Replication factor C subunit 2. (318 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
AQRAquarius intron-binding spliceosomal factor. (1482 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (309 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC107982244Uncharacterized protein. (1108 aa)
bivmUncharacterized protein. (501 aa)
rps27aUbiquitin-like domain-containing protein. (156 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42. (376 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (345 aa)
RFC5Replication factor C subunit 5. (342 aa)
H9GNG7_ANOCAMitMem_reg domain-containing protein. (229 aa)
XAB2XPA binding protein 2. (922 aa)
DDB1Damage specific DNA binding protein 1. (1140 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
TCEA1Transcription elongation factor A1. (305 aa)
ubcUncharacterized protein. (381 aa)
hmgn2Uncharacterized protein. (90 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
H9GRS7_ANOCAUbiquitin-like domain-containing protein. (33 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (69 aa)
ATAD5ATPase family AAA domain containing 5. (1748 aa)
H9GT41_ANOCAUncharacterized protein. (189 aa)
H9GT97_ANOCAUncharacterized protein. (182 aa)
POLD1DNA polymerase. (1113 aa)
LOC100559702Uncharacterized protein. (117 aa)
H9GUD4_ANOCARPOLD domain-containing protein. (210 aa)
spocd1TFIIS central domain-containing protein. (541 aa)
G1KZ53_ANOCAUncharacterized protein. (236 aa)
H9GVV6_ANOCAUncharacterized protein. (31 aa)
ercc1Uncharacterized protein. (297 aa)
GTF2H3General transcription factor IIH subunit 3. (311 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1969 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
NRDE2NRDE-2, necessary for RNA interference, domain containing. (1165 aa)
pold3Uncharacterized protein. (428 aa)
TCEANC2Transcription elongation factor A N-terminal and central domain containing 2. (208 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (530 aa)
H9GK63_ANOCAUncharacterized protein. (304 aa)
isy1Uncharacterized protein. (257 aa)
RPA3Replication protein A3. (121 aa)
cops6MitMem_reg domain-containing protein. (150 aa)
COPS7BCOP9 signalosome subunit 7B. (264 aa)
POLD2DNA polymerase delta 2, accessory subunit. (473 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1440 aa)
LIG1DNA ligase. (913 aa)
CUL4BCullin 4B; Belongs to the cullin family. (898 aa)
COPS4COP9 signalosome subunit 4. (194 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2291 aa)
COPS8COP9 signalosome subunit 8. (212 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (554 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (842 aa)
RFC3Replication factor C subunit 3. (356 aa)
xrcc1Uncharacterized protein. (656 aa)
XPAXPA, DNA damage recognition and repair factor. (280 aa)
COPS3COP9 signalosome subunit 3. (451 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
TCEA3Transcription elongation factor A3. (329 aa)
EP300E1A binding protein p300. (2484 aa)
RBX1Ring-box 1. (108 aa)
LOC100558064General transcription factor IIH subunit. (392 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
HMGN1High mobility group nucleosome binding domain 1. (98 aa)
USP7Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. (1094 aa)
COPS7ACOP9 signalosome subunit 7A. (303 aa)
MEIOBMeiosis specific with OB-fold. (471 aa)
tcea2Uncharacterized protein. (302 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
polr2cRPOLD domain-containing protein. (275 aa)
RFC1Replication factor C subunit 1. (1146 aa)
RFC4Replication factor C subunit 4. (364 aa)
POLKDNA polymerase kappa. (838 aa)
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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