STRINGSTRING
CCNH CCNH TAF1A TAF1A tbp tbp POLR2H POLR2H LOC100556472 LOC100556472 LOC100556079 LOC100556079 RRN3 RRN3 LOC100552683 LOC100552683 HIST1H4J HIST1H4J LOC100553081 LOC100553081 LOC100553870 LOC100553870 GTF2H5 GTF2H5 LOC100560345 LOC100560345 H2AZ2 H2AZ2 MNAT1 MNAT1 LOC100563266 LOC100563266 LOC103281513 LOC103281513 POLR1C POLR1C ERCC3 ERCC3 LOC100558064 LOC100558064 LOC103281873 LOC103281873 CBX3 CBX3 taf1d taf1d GTF2H3 GTF2H3 LOC100557042 LOC100557042 POLR2F POLR2F LOC100557833 LOC100557833 LOC100558030 LOC100558030 LOC100558489 LOC100558489 ENSACAP00000015206 ENSACAP00000015206 POLR2L POLR2L CDK7 CDK7 ubtf ubtf LOC100559083 LOC100559083 POLR2K POLR2K LOC103282265 LOC103282265 LOC100556861 LOC100556861 ENSACAP00000019009 ENSACAP00000019009 ENSACAP00000019109 ENSACAP00000019109 LOC100557254 LOC100557254 H9GVV6_ANOCA H9GVV6_ANOCA GTF2H1 GTF2H1 TAF1B TAF1B TBPL1 TBPL1 tbpl2 tbpl2 GTF2H4 GTF2H4 ZNRD1 ZNRD1 TWISTNB TWISTNB POLR1A POLR1A H2AZ1 H2AZ1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCNHCyclin H; Belongs to the cyclin family. (318 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (439 aa)
tbpUncharacterized protein. (300 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC100556472Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC100556079Histone H2B; Belongs to the histone H2B family. (126 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (611 aa)
LOC100552683Histone H2B; Belongs to the histone H2B family. (126 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC100553081Histone H2B 5-like. (126 aa)
LOC100553870Histone H4. (103 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
LOC100560345Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (587 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (128 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
LOC100563266DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (691 aa)
LOC103281513SprT-like domain-containing protein. (315 aa)
POLR1CRNA polymerase I and III subunit C. (348 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (719 aa)
LOC100558064General transcription factor IIH subunit. (392 aa)
LOC103281873Uncharacterized protein. (309 aa)
CBX3Chromobox 3. (184 aa)
taf1dUncharacterized protein. (196 aa)
GTF2H3General transcription factor IIH subunit 3. (311 aa)
LOC100557042Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
LOC100557833Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC100558030Histone H4. (103 aa)
LOC100558489Histone H4. (103 aa)
ENSACAP00000015206annotation not available (103 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (345 aa)
ubtfUncharacterized protein. (760 aa)
LOC100559083Histone H4. (103 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
LOC103282265Uncharacterized protein. (414 aa)
LOC100556861Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSACAP00000019009annotation not available (103 aa)
ENSACAP00000019109annotation not available (103 aa)
LOC100557254Histone H2B; Belongs to the histone H2B family. (126 aa)
H9GVV6_ANOCAUncharacterized protein. (31 aa)
GTF2H1General transcription factor IIH subunit 1. (571 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (660 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
tbpl2Uncharacterized protein. (192 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (120 aa)
TWISTNBTWIST neighbor. (197 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1704 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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