5 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hsp90aa1	HATPase_c domain-containing protein. (728 aa)
	TRAP1	TNF receptor associated protein 1. (674 aa)
	HSP90B1	Heat shock protein 90 beta family member 1. (795 aa)
	HSP90AB1	Heat shock protein 90 alpha family class B member 1. (727 aa)
	H9GT67_ANOCA	Uncharacterized protein. (128 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HSP90AB1	HSP90B1	ENSACAP00000014598	ENSACAP00000015990	Heat shock protein 90 alpha family class B member 1.	Heat shock protein 90 beta family member 1.	0.924
HSP90AB1	hsp90aa1	ENSACAP00000014598	ENSACAP00000000156	Heat shock protein 90 alpha family class B member 1.	HATPase_c domain-containing protein.	0.900
HSP90B1	HSP90AB1	ENSACAP00000015990	ENSACAP00000014598	Heat shock protein 90 beta family member 1.	Heat shock protein 90 alpha family class B member 1.	0.924
HSP90B1	hsp90aa1	ENSACAP00000015990	ENSACAP00000000156	Heat shock protein 90 beta family member 1.	HATPase_c domain-containing protein.	0.925
hsp90aa1	HSP90AB1	ENSACAP00000000156	ENSACAP00000014598	HATPase_c domain-containing protein.	Heat shock protein 90 alpha family class B member 1.	0.900
hsp90aa1	HSP90B1	ENSACAP00000000156	ENSACAP00000015990	HATPase_c domain-containing protein.	Heat shock protein 90 beta family member 1.	0.925