23 items (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100559035	Metalloendopeptidase. (372 aa)
	LOC100554797	Metalloendopeptidase. (597 aa)
	LOC100552454	ZnMc domain-containing protein. (470 aa)
	MMP27	Matrix metallopeptidase 27. (504 aa)
	LOC100553522	ZnMc domain-containing protein. (579 aa)
	LOC100553635	ZnMc domain-containing protein. (256 aa)
	MMP20	Matrix metallopeptidase 20. (484 aa)
	MEP1B	Metalloendopeptidase. (593 aa)
	MMP19	Matrix metallopeptidase 19. (475 aa)
	MMP15	Matrix metallopeptidase 15. (401 aa)
	LOC100554603	Meprin A subunit. (701 aa)
	LOC100553835	ZnMc domain-containing protein. (265 aa)
	MMP1	Matrix metallopeptidase 1. (468 aa)
	LOC100561433	ZnMc domain-containing protein. (488 aa)
	MMP13	Matrix metallopeptidase 13. (473 aa)
	MMP25	Matrix metallopeptidase 25. (562 aa)
	MMP16	Matrix metallopeptidase 16. (615 aa)
	MMP17	Matrix metallopeptidase 17. (536 aa)
	MMP24	Matrix metallopeptidase 24. (608 aa)
	LOC103282010	Metalloendopeptidase. (133 aa)
	mmp23b	Uncharacterized protein. (383 aa)
	MMP14	Matrix metallopeptidase 14. (511 aa)
	TLL1	Metalloendopeptidase. (1008 aa)

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100552454	LOC100553635	ENSACAP00000021080	ENSACAP00000018804	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.487
LOC100552454	LOC100553835	ENSACAP00000021080	ENSACAP00000012383	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.490
LOC100552454	MMP1	ENSACAP00000021080	ENSACAP00000012369	ZnMc domain-containing protein.	Matrix metallopeptidase 1.	0.526
LOC100552454	MMP13	ENSACAP00000021080	ENSACAP00000012362	ZnMc domain-containing protein.	Matrix metallopeptidase 13.	0.420
LOC100552454	MMP14	ENSACAP00000021080	ENSACAP00000001363	ZnMc domain-containing protein.	Matrix metallopeptidase 14.	0.497
LOC100552454	MMP15	ENSACAP00000021080	ENSACAP00000013819	ZnMc domain-containing protein.	Matrix metallopeptidase 15.	0.448
LOC100553635	LOC100552454	ENSACAP00000018804	ENSACAP00000021080	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.487
LOC100553635	LOC100553835	ENSACAP00000018804	ENSACAP00000012383	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.903
LOC100553635	LOC100561433	ENSACAP00000018804	ENSACAP00000012367	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.489
LOC100553635	MMP1	ENSACAP00000018804	ENSACAP00000012369	ZnMc domain-containing protein.	Matrix metallopeptidase 1.	0.490
LOC100553635	MMP13	ENSACAP00000018804	ENSACAP00000012362	ZnMc domain-containing protein.	Matrix metallopeptidase 13.	0.447
LOC100553635	MMP20	ENSACAP00000018804	ENSACAP00000017871	ZnMc domain-containing protein.	Matrix metallopeptidase 20.	0.489
LOC100553635	MMP27	ENSACAP00000018804	ENSACAP00000020451	ZnMc domain-containing protein.	Matrix metallopeptidase 27.	0.410
LOC100553835	LOC100552454	ENSACAP00000012383	ENSACAP00000021080	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.490
LOC100553835	LOC100553635	ENSACAP00000012383	ENSACAP00000018804	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.903
LOC100553835	LOC100561433	ENSACAP00000012383	ENSACAP00000012367	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.492
LOC100553835	MMP1	ENSACAP00000012383	ENSACAP00000012369	ZnMc domain-containing protein.	Matrix metallopeptidase 1.	0.495
LOC100553835	MMP13	ENSACAP00000012383	ENSACAP00000012362	ZnMc domain-containing protein.	Matrix metallopeptidase 13.	0.432
LOC100553835	MMP20	ENSACAP00000012383	ENSACAP00000017871	ZnMc domain-containing protein.	Matrix metallopeptidase 20.	0.486
LOC100553835	MMP27	ENSACAP00000012383	ENSACAP00000020451	ZnMc domain-containing protein.	Matrix metallopeptidase 27.	0.418