STRINGSTRING
PCNA PCNA POLE2 POLE2 PARP4 PARP4 NEIL2 NEIL2 POLB POLB xrcc1 xrcc1 HMGB1 HMGB1 PARP1 PARP1 APEX1 APEX1 PARP2 PARP2 OGG1 OGG1 POLE POLE MPG MPG SMUG1 SMUG1 LIG1 LIG1 PARP3 PARP3 POLD2 POLD2 POLL POLL pold3 pold3 mutyh mutyh TDG TDG nthl1 nthl1 FEN1 FEN1 POLD1 POLD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
PARP4Poly [ADP-ribose] polymerase. (1783 aa)
NEIL2Nei like DNA glycosylase 2. (332 aa)
POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (335 aa)
xrcc1Uncharacterized protein. (656 aa)
HMGB1High mobility group box 1. (212 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1006 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (317 aa)
PARP2Poly [ADP-ribose] polymerase. (566 aa)
OGG18-oxoguanine DNA glycosylase. (350 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2291 aa)
MPGN-methylpurine DNA glycosylase. (155 aa)
SMUG1Single-strand-selective monofunctional uracil-DNA glycosylase 1. (252 aa)
LIG1DNA ligase. (913 aa)
PARP3Poly [ADP-ribose] polymerase. (542 aa)
POLD2DNA polymerase delta 2, accessory subunit. (473 aa)
POLLDNA polymerase lambda; Belongs to the DNA polymerase type-X family. (574 aa)
pold3Uncharacterized protein. (428 aa)
mutyhAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (425 aa)
TDGThymine DNA glycosylase. (405 aa)
nthl1ENDO3c domain-containing protein. (77 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (382 aa)
POLD1DNA polymerase. (1113 aa)
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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