STRINGSTRING
R7T8Q0_CAPTE R7T8Q0_CAPTE R7TCL4_CAPTE R7TCL4_CAPTE R7THV1_CAPTE R7THV1_CAPTE R7TKU4_CAPTE R7TKU4_CAPTE R7TQX1_CAPTE R7TQX1_CAPTE R7TR91_CAPTE R7TR91_CAPTE R7TXU0_CAPTE R7TXU0_CAPTE R7U0Q6_CAPTE R7U0Q6_CAPTE R7U546_CAPTE R7U546_CAPTE R7UDT7_CAPTE R7UDT7_CAPTE R7ULW7_CAPTE R7ULW7_CAPTE R7UM79_CAPTE R7UM79_CAPTE R7UPP9_CAPTE R7UPP9_CAPTE CAPTEDRAFT_544 CAPTEDRAFT_544 R7VEY6_CAPTE R7VEY6_CAPTE R7VFA9_CAPTE R7VFA9_CAPTE R7VGS7_CAPTE R7VGS7_CAPTE R7VIB7_CAPTE R7VIB7_CAPTE R7VIH6_CAPTE R7VIH6_CAPTE R7VKJ3_CAPTE R7VKJ3_CAPTE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
R7T8Q0_CAPTEUncharacterized protein. (196 aa)
R7TCL4_CAPTEGeneral transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
R7THV1_CAPTECDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (306 aa)
R7TKU4_CAPTETranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (105 aa)
R7TQX1_CAPTEHelicase ATP-binding domain-containing protein. (169 aa)
R7TR91_CAPTEProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (344 aa)
R7TXU0_CAPTEHTH TFE/IIEalpha-type domain-containing protein. (419 aa)
R7U0Q6_CAPTETranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (528 aa)
R7U546_CAPTEHelicase ATP-binding domain-containing protein. (786 aa)
R7UDT7_CAPTEUncharacterized protein. (51 aa)
R7ULW7_CAPTEUncharacterized protein. (72 aa)
R7UM79_CAPTEUncharacterized protein. (70 aa)
R7UPP9_CAPTECYCLIN domain-containing protein; Belongs to the cyclin family. (331 aa)
CAPTEDRAFT_544TFIIF_beta domain-containing protein. (211 aa)
R7VEY6_CAPTEUncharacterized protein. (299 aa)
R7VFA9_CAPTEUncharacterized protein. (285 aa)
R7VGS7_CAPTEUncharacterized protein. (739 aa)
R7VIB7_CAPTETranscription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (282 aa)
R7VIH6_CAPTEUncharacterized protein. (535 aa)
R7VKJ3_CAPTEGeneral transcription factor IIH subunit. (390 aa)
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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