(11 nodes) Mixed, incl. G2/M DNA replication checkpoint, and M-phase inducer phosphatase network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7TDB9_CAPTE	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
	R7TI99_CAPTE	Uncharacterized protein. (522 aa)
	R7TX31_CAPTE	Serine/threonine-protein kinase PLK. (574 aa)
	R7TYZ8_CAPTE	Rhodanese domain-containing protein. (511 aa)
	R7UCJ1_CAPTE	Protein kinase domain-containing protein. (593 aa)
	R7UKB2_CAPTE	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (304 aa)
	R7UYA6_CAPTE	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (426 aa)
	R7V0T8_CAPTE	Protein kinase domain-containing protein. (552 aa)
	R7V7W7_CAPTE	Rhodanese domain-containing protein. (191 aa)
	R7VAK2_CAPTE	Wee1-like protein kinase. (596 aa)
	R7VLU4_CAPTE	Uncharacterized protein; Belongs to the cyclin family. (301 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7TDB9_CAPTE	R7TI99_CAPTE	R7TDB9	R7TI99	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.763
R7TDB9_CAPTE	R7TX31_CAPTE	R7TDB9	R7TX31	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase PLK.	0.859
R7TDB9_CAPTE	R7TYZ8_CAPTE	R7TDB9	R7TYZ8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Rhodanese domain-containing protein.	0.829
R7TDB9_CAPTE	R7UCJ1_CAPTE	R7TDB9	R7UCJ1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.608
R7TDB9_CAPTE	R7UKB2_CAPTE	R7TDB9	R7UKB2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.924
R7TDB9_CAPTE	R7UYA6_CAPTE	R7TDB9	R7UYA6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.950
R7TDB9_CAPTE	R7V7W7_CAPTE	R7TDB9	R7V7W7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Rhodanese domain-containing protein.	0.829
R7TDB9_CAPTE	R7VAK2_CAPTE	R7TDB9	R7VAK2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Wee1-like protein kinase.	0.916
R7TDB9_CAPTE	R7VLU4_CAPTE	R7TDB9	R7VLU4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the cyclin family.	0.905
R7TI99_CAPTE	R7TDB9_CAPTE	R7TI99	R7TDB9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.763
R7TI99_CAPTE	R7TX31_CAPTE	R7TI99	R7TX31	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.947
R7TI99_CAPTE	R7TYZ8_CAPTE	R7TI99	R7TYZ8	Uncharacterized protein.	Rhodanese domain-containing protein.	0.632
R7TI99_CAPTE	R7UKB2_CAPTE	R7TI99	R7UKB2	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.959
R7TI99_CAPTE	R7UYA6_CAPTE	R7TI99	R7UYA6	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.836
R7TI99_CAPTE	R7V0T8_CAPTE	R7TI99	R7V0T8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.762
R7TI99_CAPTE	R7V7W7_CAPTE	R7TI99	R7V7W7	Uncharacterized protein.	Rhodanese domain-containing protein.	0.632
R7TI99_CAPTE	R7VAK2_CAPTE	R7TI99	R7VAK2	Uncharacterized protein.	Wee1-like protein kinase.	0.959
R7TI99_CAPTE	R7VLU4_CAPTE	R7TI99	R7VLU4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.836
R7TX31_CAPTE	R7TDB9_CAPTE	R7TX31	R7TDB9	Serine/threonine-protein kinase PLK.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.859
R7TX31_CAPTE	R7TI99_CAPTE	R7TX31	R7TI99	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.947

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