(24 nodes) Mismatched DNA binding network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7UVD5_CAPTE	Uncharacterized protein. (74 aa)
	R7V5V5_CAPTE	DNA_mis_repair domain-containing protein. (466 aa)
	R7TAP5_CAPTE	Uncharacterized protein. (276 aa)
	R7TBG2_CAPTE	DDE_Tnp_IS1595 domain-containing protein. (86 aa)
	R7TBT2_CAPTE	Uncharacterized protein. (469 aa)
	R7TC97_CAPTE	Uncharacterized protein. (1165 aa)
	R7TCG1_CAPTE	DNA_MISMATCH_REPAIR_2 domain-containing protein. (787 aa)
	R7TFB3_CAPTE	DNA_mis_repair domain-containing protein. (843 aa)
	R7THP2_CAPTE	Uncharacterized protein. (71 aa)
	R7TP64_CAPTE	MutL_C domain-containing protein. (134 aa)
	R7TVN5_CAPTE	Uncharacterized protein. (200 aa)
	R7U135_CAPTE	DNA_MISMATCH_REPAIR_2 domain-containing protein. (271 aa)
	R7U5G4_CAPTE	DNA_mis_repair domain-containing protein. (323 aa)
	R7U9N3_CAPTE	DNA_mis_repair domain-containing protein. (293 aa)
	R7UCM3_CAPTE	DDE_Tnp_IS1595 domain-containing protein. (81 aa)
	R7UN65_CAPTE	Uncharacterized protein. (65 aa)
	R7UWK5_CAPTE	UDG domain-containing protein. (224 aa)
	R7UWW9_CAPTE	Uncharacterized protein. (794 aa)
	R7V3G3_CAPTE	DDE_Tnp_IS1595 domain-containing protein. (145 aa)
	R7VBK3_CAPTE	DDE_Tnp_IS1595 domain-containing protein. (101 aa)
	R7VIC0_CAPTE	PWWP domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1270 aa)
	R7VMC3_CAPTE	PWWP domain-containing protein. (440 aa)
	R7VDN3_CAPTE	DNA_MISMATCH_REPAIR_2 domain-containing protein. (823 aa)
	R7VE61_CAPTE	Uncharacterized protein. (205 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7TAP5_CAPTE	R7TBT2_CAPTE	R7TAP5	R7TBT2	Uncharacterized protein.	Uncharacterized protein.	0.956
R7TAP5_CAPTE	R7TC97_CAPTE	R7TAP5	R7TC97	Uncharacterized protein.	Uncharacterized protein.	0.723
R7TAP5_CAPTE	R7TCG1_CAPTE	R7TAP5	R7TCG1	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.924
R7TAP5_CAPTE	R7TFB3_CAPTE	R7TAP5	R7TFB3	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.733
R7TAP5_CAPTE	R7THP2_CAPTE	R7TAP5	R7THP2	Uncharacterized protein.	Uncharacterized protein.	0.908
R7TAP5_CAPTE	R7TP64_CAPTE	R7TAP5	R7TP64	Uncharacterized protein.	MutL_C domain-containing protein.	0.933
R7TAP5_CAPTE	R7U135_CAPTE	R7TAP5	R7U135	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.927
R7TAP5_CAPTE	R7U5G4_CAPTE	R7TAP5	R7U5G4	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.913
R7TAP5_CAPTE	R7U9N3_CAPTE	R7TAP5	R7U9N3	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.918
R7TAP5_CAPTE	R7UVD5_CAPTE	R7TAP5	R7UVD5	Uncharacterized protein.	Uncharacterized protein.	0.908
R7TAP5_CAPTE	R7UWW9_CAPTE	R7TAP5	R7UWW9	Uncharacterized protein.	Uncharacterized protein.	0.926
R7TAP5_CAPTE	R7V5V5_CAPTE	R7TAP5	R7V5V5	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.901
R7TAP5_CAPTE	R7VDN3_CAPTE	R7TAP5	R7VDN3	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.951
R7TAP5_CAPTE	R7VE61_CAPTE	R7TAP5	R7VE61	Uncharacterized protein.	Uncharacterized protein.	0.919
R7TAP5_CAPTE	R7VIC0_CAPTE	R7TAP5	R7VIC0	Uncharacterized protein.	PWWP domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.954
R7TAP5_CAPTE	R7VMC3_CAPTE	R7TAP5	R7VMC3	Uncharacterized protein.	PWWP domain-containing protein.	0.948
R7TBG2_CAPTE	R7TCG1_CAPTE	R7TBG2	R7TCG1	DDE_Tnp_IS1595 domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.870
R7TBG2_CAPTE	R7THP2_CAPTE	R7TBG2	R7THP2	DDE_Tnp_IS1595 domain-containing protein.	Uncharacterized protein.	0.816
R7TBG2_CAPTE	R7U135_CAPTE	R7TBG2	R7U135	DDE_Tnp_IS1595 domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.857
R7TBG2_CAPTE	R7U5G4_CAPTE	R7TBG2	R7U5G4	DDE_Tnp_IS1595 domain-containing protein.	DNA_mis_repair domain-containing protein.	0.816

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