(10 nodes) Nucleotide-excision repair, DNA incision network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7TEW3_CAPTE	ERCC4 domain-containing protein. (891 aa)
	R7TQX1_CAPTE	Helicase ATP-binding domain-containing protein. (169 aa)
	R7U546_CAPTE	Helicase ATP-binding domain-containing protein. (786 aa)
	R7U5K1_CAPTE	ENDO3c domain-containing protein. (300 aa)
	R7UBT8_CAPTE	ENDO3c domain-containing protein. (212 aa)
	R7UJD2_CAPTE	XPA_C domain-containing protein. (272 aa)
	R7VGS7_CAPTE	Uncharacterized protein. (739 aa)
	R7UL61_CAPTE	XPA_C domain-containing protein. (272 aa)
	R7UR54_CAPTE	ENDO3c domain-containing protein. (231 aa)
	R7VCC8_CAPTE	Uncharacterized protein. (261 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7TEW3_CAPTE	R7TQX1_CAPTE	R7TEW3	R7TQX1	ERCC4 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.834
R7TEW3_CAPTE	R7U546_CAPTE	R7TEW3	R7U546	ERCC4 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.834
R7TEW3_CAPTE	R7U5K1_CAPTE	R7TEW3	R7U5K1	ERCC4 domain-containing protein.	ENDO3c domain-containing protein.	0.554
R7TEW3_CAPTE	R7UBT8_CAPTE	R7TEW3	R7UBT8	ERCC4 domain-containing protein.	ENDO3c domain-containing protein.	0.618
R7TEW3_CAPTE	R7UJD2_CAPTE	R7TEW3	R7UJD2	ERCC4 domain-containing protein.	XPA_C domain-containing protein.	0.984
R7TEW3_CAPTE	R7UL61_CAPTE	R7TEW3	R7UL61	ERCC4 domain-containing protein.	XPA_C domain-containing protein.	0.984
R7TEW3_CAPTE	R7UR54_CAPTE	R7TEW3	R7UR54	ERCC4 domain-containing protein.	ENDO3c domain-containing protein.	0.618
R7TEW3_CAPTE	R7VCC8_CAPTE	R7TEW3	R7VCC8	ERCC4 domain-containing protein.	Uncharacterized protein.	0.998
R7TEW3_CAPTE	R7VGS7_CAPTE	R7TEW3	R7VGS7	ERCC4 domain-containing protein.	Uncharacterized protein.	0.884
R7TQX1_CAPTE	R7TEW3_CAPTE	R7TQX1	R7TEW3	Helicase ATP-binding domain-containing protein.	ERCC4 domain-containing protein.	0.834
R7TQX1_CAPTE	R7U5K1_CAPTE	R7TQX1	R7U5K1	Helicase ATP-binding domain-containing protein.	ENDO3c domain-containing protein.	0.479
R7TQX1_CAPTE	R7UJD2_CAPTE	R7TQX1	R7UJD2	Helicase ATP-binding domain-containing protein.	XPA_C domain-containing protein.	0.942
R7TQX1_CAPTE	R7UL61_CAPTE	R7TQX1	R7UL61	Helicase ATP-binding domain-containing protein.	XPA_C domain-containing protein.	0.942
R7TQX1_CAPTE	R7VCC8_CAPTE	R7TQX1	R7VCC8	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.813
R7TQX1_CAPTE	R7VGS7_CAPTE	R7TQX1	R7VGS7	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.987
R7U546_CAPTE	R7TEW3_CAPTE	R7U546	R7TEW3	Helicase ATP-binding domain-containing protein.	ERCC4 domain-containing protein.	0.834
R7U546_CAPTE	R7U5K1_CAPTE	R7U546	R7U5K1	Helicase ATP-binding domain-containing protein.	ENDO3c domain-containing protein.	0.479
R7U546_CAPTE	R7UJD2_CAPTE	R7U546	R7UJD2	Helicase ATP-binding domain-containing protein.	XPA_C domain-containing protein.	0.942
R7U546_CAPTE	R7UL61_CAPTE	R7U546	R7UL61	Helicase ATP-binding domain-containing protein.	XPA_C domain-containing protein.	0.942
R7U546_CAPTE	R7VCC8_CAPTE	R7U546	R7VCC8	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.813

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