(28 nodes) Apical junction complex network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7VBV1_CAPTE	Uncharacterized protein. (359 aa)
	R7VKL8_CAPTE	Uncharacterized protein. (680 aa)
	R7VKW0_CAPTE	Uncharacterized protein. (138 aa)
	R7VLM2_CAPTE	Uncharacterized protein. (862 aa)
	R7T8B9_CAPTE	Uncharacterized protein. (154 aa)
	R7T764_CAPTE	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (358 aa)
	R7T6X8_CAPTE	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (228 aa)
	R7V2A4_CAPTE	Uncharacterized protein. (2836 aa)
	R7V0Z9_CAPTE	Uncharacterized protein; Belongs to the MAGUK family. (1798 aa)
	R7UQV5_CAPTE	G_PROTEIN_RECEP_F1_2 domain-containing protein. (306 aa)
	R7UM84_CAPTE	Uncharacterized protein. (342 aa)
	R7UKL6_CAPTE	Uncharacterized protein. (364 aa)
	R7UKC2_CAPTE	G_PROTEIN_RECEP_F1_2 domain-containing protein. (303 aa)
	R7UI22_CAPTE	WW domain-containing protein. (75 aa)
	R7UGS7_CAPTE	PH domain-containing protein. (140 aa)
	R7UC61_CAPTE	ASD2 domain-containing protein. (219 aa)
	R7U8L7_CAPTE	Uncharacterized protein. (171 aa)
	R7U6B9_CAPTE	Uncharacterized protein. (199 aa)
	R7U0G4_CAPTE	Uncharacterized protein. (199 aa)
	R7TXQ2_CAPTE	FERM domain-containing protein. (550 aa)
	R7TW21_CAPTE	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	R7TRB0_CAPTE	Uncharacterized protein. (316 aa)
	R7TK68_CAPTE	Uncharacterized protein. (312 aa)
	R7TGF2_CAPTE	Uncharacterized protein. (315 aa)
	R7T8C4_CAPTE	G_PROTEIN_RECEP_F1_2 domain-containing protein. (362 aa)
	R7V3G7_CAPTE	Uncharacterized protein; Belongs to the MAGUK family. (570 aa)
	R7V5J4_CAPTE	Uncharacterized protein. (862 aa)
	R7VAA0_CAPTE	Uncharacterized protein. (143 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7TRB0_CAPTE	R7U0G4_CAPTE	R7TRB0	R7U0G4	Uncharacterized protein.	Uncharacterized protein.	0.992
R7TRB0_CAPTE	R7UGS7_CAPTE	R7TRB0	R7UGS7	Uncharacterized protein.	PH domain-containing protein.	0.628
R7TRB0_CAPTE	R7UI22_CAPTE	R7TRB0	R7UI22	Uncharacterized protein.	WW domain-containing protein.	0.628
R7TRB0_CAPTE	R7V0Z9_CAPTE	R7TRB0	R7V0Z9	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.459
R7TRB0_CAPTE	R7V3G7_CAPTE	R7TRB0	R7V3G7	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.908
R7TRB0_CAPTE	R7V5J4_CAPTE	R7TRB0	R7V5J4	Uncharacterized protein.	Uncharacterized protein.	0.550
R7TRB0_CAPTE	R7VBV1_CAPTE	R7TRB0	R7VBV1	Uncharacterized protein.	Uncharacterized protein.	0.908
R7TRB0_CAPTE	R7VKW0_CAPTE	R7TRB0	R7VKW0	Uncharacterized protein.	Uncharacterized protein.	0.773
R7TRB0_CAPTE	R7VLM2_CAPTE	R7TRB0	R7VLM2	Uncharacterized protein.	Uncharacterized protein.	0.773
R7TXQ2_CAPTE	R7U0G4_CAPTE	R7TXQ2	R7U0G4	FERM domain-containing protein.	Uncharacterized protein.	0.528
R7TXQ2_CAPTE	R7UGS7_CAPTE	R7TXQ2	R7UGS7	FERM domain-containing protein.	PH domain-containing protein.	0.556
R7TXQ2_CAPTE	R7UI22_CAPTE	R7TXQ2	R7UI22	FERM domain-containing protein.	WW domain-containing protein.	0.556
R7TXQ2_CAPTE	R7VKW0_CAPTE	R7TXQ2	R7VKW0	FERM domain-containing protein.	Uncharacterized protein.	0.723
R7TXQ2_CAPTE	R7VLM2_CAPTE	R7TXQ2	R7VLM2	FERM domain-containing protein.	Uncharacterized protein.	0.723
R7U0G4_CAPTE	R7TRB0_CAPTE	R7U0G4	R7TRB0	Uncharacterized protein.	Uncharacterized protein.	0.992
R7U0G4_CAPTE	R7TXQ2_CAPTE	R7U0G4	R7TXQ2	Uncharacterized protein.	FERM domain-containing protein.	0.528
R7U0G4_CAPTE	R7V0Z9_CAPTE	R7U0G4	R7V0Z9	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.597
R7U0G4_CAPTE	R7V3G7_CAPTE	R7U0G4	R7V3G7	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.610
R7U0G4_CAPTE	R7V5J4_CAPTE	R7U0G4	R7V5J4	Uncharacterized protein.	Uncharacterized protein.	0.490
R7U0G4_CAPTE	R7VBV1_CAPTE	R7U0G4	R7VBV1	Uncharacterized protein.	Uncharacterized protein.	0.610

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