(39 nodes) Motile cilium assembly network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7T4M6_CAPTE	Calponin-homology (CH) domain-containing protein. (3138 aa)
	R7T4V2_CAPTE	Uncharacterized protein. (132 aa)
	R7T5S7_CAPTE	Uncharacterized protein. (96 aa)
	R7T626_CAPTE	Uncharacterized protein. (285 aa)
	R7T801_CAPTE	Uncharacterized protein. (128 aa)
	R7T8H8_CAPTE	WD_REPEATS_REGION domain-containing protein. (413 aa)
	R7T9W6_CAPTE	Uncharacterized protein. (372 aa)
	R7TBB6_CAPTE	Uncharacterized protein. (422 aa)
	R7TGL7_CAPTE	Uncharacterized protein. (1201 aa)
	R7TJC7_CAPTE	Uncharacterized protein. (363 aa)
	R7TRM6_CAPTE	Uncharacterized protein. (549 aa)
	R7TXJ7_CAPTE	Uncharacterized protein. (2241 aa)
	R7U7L2_CAPTE	Uncharacterized protein. (283 aa)
	R7U7U3_CAPTE	WD_REPEATS_REGION domain-containing protein. (1579 aa)
	R7UF76_CAPTE	Uncharacterized protein. (624 aa)
	R7UG89_CAPTE	Uncharacterized protein. (223 aa)
	R7UIF0_CAPTE	Uncharacterized protein. (147 aa)
	R7UKG6_CAPTE	Uncharacterized protein. (879 aa)
	R7UNL3_CAPTE	IFT81_CH domain-containing protein. (680 aa)
	R7URQ4_CAPTE	Uncharacterized protein. (558 aa)
	R7USI4_CAPTE	WD_REPEATS_REGION domain-containing protein. (893 aa)
	R7UTG0_CAPTE	Uncharacterized protein. (898 aa)
	R7UTJ0_CAPTE	Uncharacterized protein. (286 aa)
	R7UV42_CAPTE	TPR_REGION domain-containing protein. (354 aa)
	R7T3T7_CAPTE	Uncharacterized protein. (434 aa)
	R7UVY0_CAPTE	Uncharacterized protein. (637 aa)
	R7UYN5_CAPTE	Uncharacterized protein. (533 aa)
	R7V0B1_CAPTE	Uncharacterized protein. (858 aa)
	R7V1X0_CAPTE	Uncharacterized protein. (272 aa)
	R7V227_CAPTE	DUF4515 domain-containing protein. (268 aa)
	R7V264_CAPTE	Uncharacterized protein. (1061 aa)
	R7V2R9_CAPTE	DUF4471 domain-containing protein. (166 aa)
	R7V5P2_CAPTE	Uncharacterized protein. (517 aa)
	R7V656_CAPTE	MYND-type domain-containing protein. (452 aa)
	R7V7M5_CAPTE	Uncharacterized protein. (163 aa)
	R7V9D8_CAPTE	Uncharacterized protein. (852 aa)
	R7VGL0_CAPTE	Uncharacterized protein. (887 aa)
	R7VHJ3_CAPTE	Uncharacterized protein. (507 aa)
	R7VJ17_CAPTE	Uncharacterized protein. (217 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T3T7_CAPTE	R7T801_CAPTE	R7T3T7	R7T801	Uncharacterized protein.	Uncharacterized protein.	0.839
R7T3T7_CAPTE	R7TJC7_CAPTE	R7T3T7	R7TJC7	Uncharacterized protein.	Uncharacterized protein.	0.839
R7T4M6_CAPTE	R7TXJ7_CAPTE	R7T4M6	R7TXJ7	Calponin-homology (CH) domain-containing protein.	Uncharacterized protein.	0.581
R7T4M6_CAPTE	R7U7U3_CAPTE	R7T4M6	R7U7U3	Calponin-homology (CH) domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.413
R7T4M6_CAPTE	R7VGL0_CAPTE	R7T4M6	R7VGL0	Calponin-homology (CH) domain-containing protein.	Uncharacterized protein.	0.545
R7T5S7_CAPTE	R7T8H8_CAPTE	R7T5S7	R7T8H8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.476
R7T5S7_CAPTE	R7VHJ3_CAPTE	R7T5S7	R7VHJ3	Uncharacterized protein.	Uncharacterized protein.	0.513
R7T626_CAPTE	R7UF76_CAPTE	R7T626	R7UF76	Uncharacterized protein.	Uncharacterized protein.	0.456
R7T626_CAPTE	R7UTG0_CAPTE	R7T626	R7UTG0	Uncharacterized protein.	Uncharacterized protein.	0.408
R7T801_CAPTE	R7T3T7_CAPTE	R7T801	R7T3T7	Uncharacterized protein.	Uncharacterized protein.	0.839
R7T8H8_CAPTE	R7T5S7_CAPTE	R7T8H8	R7T5S7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.476
R7T8H8_CAPTE	R7UIF0_CAPTE	R7T8H8	R7UIF0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.436
R7T8H8_CAPTE	R7UNL3_CAPTE	R7T8H8	R7UNL3	WD_REPEATS_REGION domain-containing protein.	IFT81_CH domain-containing protein.	0.706
R7T8H8_CAPTE	R7V656_CAPTE	R7T8H8	R7V656	WD_REPEATS_REGION domain-containing protein.	MYND-type domain-containing protein.	0.436
R7TBB6_CAPTE	R7UG89_CAPTE	R7TBB6	R7UG89	Uncharacterized protein.	Uncharacterized protein.	0.726
R7TGL7_CAPTE	R7URQ4_CAPTE	R7TGL7	R7URQ4	Uncharacterized protein.	Uncharacterized protein.	0.860
R7TJC7_CAPTE	R7T3T7_CAPTE	R7TJC7	R7T3T7	Uncharacterized protein.	Uncharacterized protein.	0.839
R7TXJ7_CAPTE	R7T4M6_CAPTE	R7TXJ7	R7T4M6	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.581
R7TXJ7_CAPTE	R7U7L2_CAPTE	R7TXJ7	R7U7L2	Uncharacterized protein.	Uncharacterized protein.	0.536
R7TXJ7_CAPTE	R7V9D8_CAPTE	R7TXJ7	R7V9D8	Uncharacterized protein.	Uncharacterized protein.	0.740

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