(50 nodes) Synapse organization network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7VKV7_CAPTE	C2 domain-containing protein. (269 aa)
	R7VK42_CAPTE	Uncharacterized protein; Belongs to the MAGUK family. (659 aa)
	R7VK29_CAPTE	Uncharacterized protein. (240 aa)
	R7VJS6_CAPTE	Fibrinogen C-terminal domain-containing protein. (274 aa)
	R7VGQ0_CAPTE	Uncharacterized protein. (471 aa)
	R7VFD9_CAPTE	Uncharacterized protein. (1670 aa)
	R7VEY2_CAPTE	Uncharacterized protein. (326 aa)
	R7VCR0_CAPTE	Uncharacterized protein. (785 aa)
	R7VC02_CAPTE	Uncharacterized protein. (1249 aa)
	R7V685_CAPTE	Fibrinogen C-terminal domain-containing protein. (190 aa)
	R7V5Y7_CAPTE	VPS9 domain-containing protein. (762 aa)
	R7V5Q6_CAPTE	TGc domain-containing protein. (138 aa)
	R7V3C2_CAPTE	Fibrinogen C-terminal domain-containing protein. (205 aa)
	R7V2X5_CAPTE	Uncharacterized protein. (1050 aa)
	R7V1J7_CAPTE	Uncharacterized protein. (688 aa)
	R7V1G3_CAPTE	L27 domain-containing protein. (76 aa)
	R7V029_CAPTE	MBD domain-containing protein. (205 aa)
	R7UUA7_CAPTE	IGFBP N-terminal domain-containing protein. (243 aa)
	R7UNI3_CAPTE	Uncharacterized protein. (118 aa)
	R7UH93_CAPTE	PDZ domain-containing protein. (54 aa)
	R7UGA3_CAPTE	Uncharacterized protein. (146 aa)
	R7UFZ1_CAPTE	GuKc domain-containing protein. (470 aa)
	R7UFW9_CAPTE	Uncharacterized protein. (251 aa)
	R7U9P5_CAPTE	PID domain-containing protein. (239 aa)
	R7U977_CAPTE	Uncharacterized protein. (793 aa)
	R7U7X7_CAPTE	Uncharacterized protein. (169 aa)
	R7U7N8_CAPTE	Fibrinogen C-terminal domain-containing protein. (171 aa)
	R7U729_CAPTE	Uncharacterized protein. (444 aa)
	R7U712_CAPTE	Uncharacterized protein. (285 aa)
	R7U490_CAPTE	Uncharacterized protein. (237 aa)
	R7U2T1_CAPTE	Uncharacterized protein. (496 aa)
	R7TZR1_CAPTE	Uncharacterized protein. (1209 aa)
	R7TYR5_CAPTE	Uncharacterized protein. (1040 aa)
	R7TV83_CAPTE	Uncharacterized protein. (174 aa)
	R7TS04_CAPTE	Uncharacterized protein. (142 aa)
	R7TMH7_CAPTE	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (639 aa)
	R7TLR1_CAPTE	Uncharacterized protein. (407 aa)
	R7TK36_CAPTE	Homeobox domain-containing protein. (56 aa)
	R7TJH1_CAPTE	Uncharacterized protein. (223 aa)
	R7TJ54_CAPTE	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family. (679 aa)
	R7TIX3_CAPTE	Uncharacterized protein. (156 aa)
	R7THM9_CAPTE	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (276 aa)
	R7TE17_CAPTE	Uncharacterized protein. (1260 aa)
	R7TCR5_CAPTE	Uncharacterized protein. (106 aa)
	R7TCR1_CAPTE	Uncharacterized protein. (369 aa)
	R7TC12_CAPTE	WH2 domain-containing protein. (449 aa)
	R7T974_CAPTE	AH domain-containing protein. (298 aa)
	R7T6W5_CAPTE	Spatacsin_C domain-containing protein. (2424 aa)
	R7T3M3_CAPTE	Uncharacterized protein. (282 aa)
	R7T385_CAPTE	Uncharacterized protein. (541 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T3M3_CAPTE	R7TJH1_CAPTE	R7T3M3	R7TJH1	Uncharacterized protein.	Uncharacterized protein.	0.763
R7T3M3_CAPTE	R7VC02_CAPTE	R7T3M3	R7VC02	Uncharacterized protein.	Uncharacterized protein.	0.763
R7T6W5_CAPTE	R7V5Y7_CAPTE	R7T6W5	R7V5Y7	Spatacsin_C domain-containing protein.	VPS9 domain-containing protein.	0.463
R7TC12_CAPTE	R7TJH1_CAPTE	R7TC12	R7TJH1	WH2 domain-containing protein.	Uncharacterized protein.	0.604
R7TC12_CAPTE	R7UH93_CAPTE	R7TC12	R7UH93	WH2 domain-containing protein.	PDZ domain-containing protein.	0.561
R7TC12_CAPTE	R7V1G3_CAPTE	R7TC12	R7V1G3	WH2 domain-containing protein.	L27 domain-containing protein.	0.561
R7TC12_CAPTE	R7VC02_CAPTE	R7TC12	R7VC02	WH2 domain-containing protein.	Uncharacterized protein.	0.604
R7TC12_CAPTE	R7VK42_CAPTE	R7TC12	R7VK42	WH2 domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.561
R7TCR1_CAPTE	R7TJH1_CAPTE	R7TCR1	R7TJH1	Uncharacterized protein.	Uncharacterized protein.	0.452
R7TCR1_CAPTE	R7UGA3_CAPTE	R7TCR1	R7UGA3	Uncharacterized protein.	Uncharacterized protein.	0.513
R7TCR1_CAPTE	R7VC02_CAPTE	R7TCR1	R7VC02	Uncharacterized protein.	Uncharacterized protein.	0.452
R7TE17_CAPTE	R7UUA7_CAPTE	R7TE17	R7UUA7	Uncharacterized protein.	IGFBP N-terminal domain-containing protein.	0.605
R7TE17_CAPTE	R7V1J7_CAPTE	R7TE17	R7V1J7	Uncharacterized protein.	Uncharacterized protein.	0.588
R7TIX3_CAPTE	R7TS04_CAPTE	R7TIX3	R7TS04	Uncharacterized protein.	Uncharacterized protein.	0.744
R7TIX3_CAPTE	R7TZR1_CAPTE	R7TIX3	R7TZR1	Uncharacterized protein.	Uncharacterized protein.	0.744
R7TJH1_CAPTE	R7T3M3_CAPTE	R7TJH1	R7T3M3	Uncharacterized protein.	Uncharacterized protein.	0.763
R7TJH1_CAPTE	R7TC12_CAPTE	R7TJH1	R7TC12	Uncharacterized protein.	WH2 domain-containing protein.	0.604
R7TJH1_CAPTE	R7TCR1_CAPTE	R7TJH1	R7TCR1	Uncharacterized protein.	Uncharacterized protein.	0.452
R7TJH1_CAPTE	R7TLR1_CAPTE	R7TJH1	R7TLR1	Uncharacterized protein.	Uncharacterized protein.	0.550
R7TJH1_CAPTE	R7TYR5_CAPTE	R7TJH1	R7TYR5	Uncharacterized protein.	Uncharacterized protein.	0.832

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