26 items (Capitella teleta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7T444_CAPTE	Uncharacterized protein. (417 aa)
	R7TAJ1_CAPTE	MRP-S23 domain-containing protein. (126 aa)
	R7T330_CAPTE	Uncharacterized protein. (97 aa)
	R7TB31_CAPTE	Uncharacterized protein. (73 aa)
	R7TCB3_CAPTE	Uncharacterized protein. (121 aa)
	R7TN18_CAPTE	Uncharacterized protein. (341 aa)
	R7TPA7_CAPTE	Uncharacterized protein. (149 aa)
	R7TPW8_CAPTE	Uncharacterized protein. (203 aa)
	R7TS92_CAPTE	Ribosomal_S7 domain-containing protein. (242 aa)
	R7TTF6_CAPTE	Uncharacterized protein. (81 aa)
	R7TVE8_CAPTE	Uncharacterized protein. (245 aa)
	R7TVK8_CAPTE	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (157 aa)
	R7TY19_CAPTE	Uncharacterized protein. (103 aa)
	R7U0I8_CAPTE	Ribosomal_S10 domain-containing protein. (159 aa)
	R7U3I2_CAPTE	Uncharacterized protein. (89 aa)
	R7U8U5_CAPTE	Uncharacterized protein. (84 aa)
	R7UIB5_CAPTE	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (130 aa)
	R7UIH9_CAPTE	Uncharacterized protein. (316 aa)
	R7UR14_CAPTE	Uncharacterized protein. (210 aa)
	R7UXX5_CAPTE	Uncharacterized protein. (225 aa)
	R7UZ26_CAPTE	Uncharacterized protein. (231 aa)
	R7V275_CAPTE	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (442 aa)
	R7V360_CAPTE	Uncharacterized protein. (171 aa)
	R7V5Y2_CAPTE	Uncharacterized protein. (90 aa)
	R7V758_CAPTE	L51_S25_CI-B8 domain-containing protein. (178 aa)
	R7VAW2_CAPTE	Uncharacterized protein. (342 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T330_CAPTE	R7T444_CAPTE	R7T330	R7T444	Uncharacterized protein.	Uncharacterized protein.	0.986
R7T330_CAPTE	R7TAJ1_CAPTE	R7T330	R7TAJ1	Uncharacterized protein.	MRP-S23 domain-containing protein.	0.994
R7T330_CAPTE	R7TB31_CAPTE	R7T330	R7TB31	Uncharacterized protein.	Uncharacterized protein.	0.995
R7T330_CAPTE	R7TCB3_CAPTE	R7T330	R7TCB3	Uncharacterized protein.	Uncharacterized protein.	0.987
R7T330_CAPTE	R7TN18_CAPTE	R7T330	R7TN18	Uncharacterized protein.	Uncharacterized protein.	0.992
R7T330_CAPTE	R7TPA7_CAPTE	R7T330	R7TPA7	Uncharacterized protein.	Uncharacterized protein.	0.984
R7T330_CAPTE	R7TPW8_CAPTE	R7T330	R7TPW8	Uncharacterized protein.	Uncharacterized protein.	0.989
R7T330_CAPTE	R7TS92_CAPTE	R7T330	R7TS92	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.987
R7T330_CAPTE	R7TTF6_CAPTE	R7T330	R7TTF6	Uncharacterized protein.	Uncharacterized protein.	0.984
R7T330_CAPTE	R7TVE8_CAPTE	R7T330	R7TVE8	Uncharacterized protein.	Uncharacterized protein.	0.989
R7T330_CAPTE	R7TVK8_CAPTE	R7T330	R7TVK8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.988
R7T330_CAPTE	R7TY19_CAPTE	R7T330	R7TY19	Uncharacterized protein.	Uncharacterized protein.	0.997
R7T330_CAPTE	R7U0I8_CAPTE	R7T330	R7U0I8	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.989
R7T330_CAPTE	R7U3I2_CAPTE	R7T330	R7U3I2	Uncharacterized protein.	Uncharacterized protein.	0.981
R7T330_CAPTE	R7U8U5_CAPTE	R7T330	R7U8U5	Uncharacterized protein.	Uncharacterized protein.	0.979
R7T330_CAPTE	R7UIB5_CAPTE	R7T330	R7UIB5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.968
R7T330_CAPTE	R7UIH9_CAPTE	R7T330	R7UIH9	Uncharacterized protein.	Uncharacterized protein.	0.979
R7T330_CAPTE	R7UR14_CAPTE	R7T330	R7UR14	Uncharacterized protein.	Uncharacterized protein.	0.985
R7T330_CAPTE	R7UXX5_CAPTE	R7T330	R7UXX5	Uncharacterized protein.	Uncharacterized protein.	0.990
R7T330_CAPTE	R7UZ26_CAPTE	R7T330	R7UZ26	Uncharacterized protein.	Uncharacterized protein.	0.979

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