(64 nodes) Nuclear body network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7VM28_CAPTE	Uncharacterized protein. (519 aa)
	R7T3U4_CAPTE	NARG2_C domain-containing protein. (831 aa)
	R7T3V8_CAPTE	Uncharacterized protein. (269 aa)
	R7T4X8_CAPTE	Endo/exonuclease/phosphatase domain-containing protein. (319 aa)
	R7T510_CAPTE	YTH domain-containing protein. (617 aa)
	R7T7S6_CAPTE	Small ubiquitin-related modifier. (90 aa)
	R7T8K0_CAPTE	Uncharacterized protein. (291 aa)
	R7TEG0_CAPTE	WD_REPEATS_REGION domain-containing protein. (336 aa)
	R7TIJ0_CAPTE	Uncharacterized protein. (181 aa)
	R7TIW3_CAPTE	RRM domain-containing protein. (152 aa)
	R7TJ67_CAPTE	AlbA_2 domain-containing protein. (270 aa)
	R7TLV3_CAPTE	Uncharacterized protein. (513 aa)
	R7TM25_CAPTE	Uncharacterized protein. (267 aa)
	R7TMX0_CAPTE	Cwf21 domain-containing protein. (117 aa)
	R7TQ48_CAPTE	RRM domain-containing protein. (711 aa)
	R7TQR5_CAPTE	Uncharacterized protein. (462 aa)
	R7TUU8_CAPTE	RNA_GG_bind domain-containing protein. (422 aa)
	R7TWX6_CAPTE	Uncharacterized protein. (385 aa)
	R7TX14_CAPTE	Nop domain-containing protein. (488 aa)
	R7TZL2_CAPTE	C3H1-type domain-containing protein. (316 aa)
	R7TZS0_CAPTE	Tudor domain-containing protein. (279 aa)
	R7U0U7_CAPTE	Coilin_N domain-containing protein. (506 aa)
	R7U1V7_CAPTE	RRM domain-containing protein. (160 aa)
	R7U247_CAPTE	Btz domain-containing protein. (687 aa)
	R7U407_CAPTE	SFM domain-containing protein. (353 aa)
	R7U5K4_CAPTE	Uncharacterized protein. (392 aa)
	R7U6I4_CAPTE	Cwf21 domain-containing protein. (248 aa)
	R7U7K6_CAPTE	Uncharacterized protein. (192 aa)
	R7U8B2_CAPTE	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. Belongs to the adenylate kinase family. AK6 subfamily. (175 aa)
	R7U8Q5_CAPTE	Uncharacterized protein. (233 aa)
	R7UBX3_CAPTE	Uncharacterized protein. (1087 aa)
	R7UCR7_CAPTE	WD_REPEATS_REGION domain-containing protein. (385 aa)
	R7UED6_CAPTE	Uncharacterized protein. (606 aa)
	R7UEQ1_CAPTE	Uncharacterized protein. (252 aa)
	R7UFX5_CAPTE	Uncharacterized protein. (453 aa)
	R7UGN2_CAPTE	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (307 aa)
	R7UIW6_CAPTE	Uncharacterized protein. (823 aa)
	R7UIY8_CAPTE	Uncharacterized protein. (378 aa)
	R7UJ16_CAPTE	Uncharacterized protein. (233 aa)
	R7UJ88_CAPTE	Tudor domain-containing protein. (235 aa)
	R7UK65_CAPTE	Uncharacterized protein. (628 aa)
	R7UL74_CAPTE	Uncharacterized protein. (291 aa)
	R7VM53_CAPTE	Uncharacterized protein. (184 aa)
	R7UME4_CAPTE	Uncharacterized protein. (66 aa)
	R7URV0_CAPTE	RRM domain-containing protein. (458 aa)
	R7US38_CAPTE	Uncharacterized protein. (220 aa)
	R7USX8_CAPTE	Uncharacterized protein. (288 aa)
	R7UTY6_CAPTE	Fe2OG dioxygenase domain-containing protein. (230 aa)
	R7UU20_CAPTE	Uncharacterized protein. (141 aa)
	R7UVN5_CAPTE	SAP domain-containing protein. (251 aa)
	R7UYG0_CAPTE	RING-type domain-containing protein. (341 aa)
	R7V136_CAPTE	Uncharacterized protein. (321 aa)
	R7V2A0_CAPTE	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (608 aa)
	R7V2Y5_CAPTE	Daxx domain-containing protein. (244 aa)
	R7V3E5_CAPTE	Uncharacterized protein. (66 aa)
	R7V4B3_CAPTE	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (177 aa)
	R7V4R8_CAPTE	Uncharacterized protein. (540 aa)
	R7V7S5_CAPTE	Uncharacterized protein. (762 aa)
	R7V9S5_CAPTE	Uncharacterized protein. (767 aa)
	R7VB22_CAPTE	RRM domain-containing protein. (163 aa)
	R7VBL7_CAPTE	DUF2040 domain-containing protein. (434 aa)
	R7VDE1_CAPTE	WD_REPEATS_REGION domain-containing protein. (410 aa)
	R7VGZ3_CAPTE	WD_REPEATS_REGION domain-containing protein. (164 aa)
	R7VIP8_CAPTE	CP-type G domain-containing protein. (619 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T3U4_CAPTE	R7UIW6_CAPTE	R7T3U4	R7UIW6	NARG2_C domain-containing protein.	Uncharacterized protein.	0.518
R7T3V8_CAPTE	R7TMX0_CAPTE	R7T3V8	R7TMX0	Uncharacterized protein.	Cwf21 domain-containing protein.	0.586
R7T3V8_CAPTE	R7U6I4_CAPTE	R7T3V8	R7U6I4	Uncharacterized protein.	Cwf21 domain-containing protein.	0.586
R7T4X8_CAPTE	R7T7S6_CAPTE	R7T4X8	R7T7S6	Endo/exonuclease/phosphatase domain-containing protein.	Small ubiquitin-related modifier.	0.884
R7T510_CAPTE	R7TIJ0_CAPTE	R7T510	R7TIJ0	YTH domain-containing protein.	Uncharacterized protein.	0.522
R7T510_CAPTE	R7TIW3_CAPTE	R7T510	R7TIW3	YTH domain-containing protein.	RRM domain-containing protein.	0.522
R7T510_CAPTE	R7UTY6_CAPTE	R7T510	R7UTY6	YTH domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.513
R7T7S6_CAPTE	R7T4X8_CAPTE	R7T7S6	R7T4X8	Small ubiquitin-related modifier.	Endo/exonuclease/phosphatase domain-containing protein.	0.884
R7T7S6_CAPTE	R7TJ67_CAPTE	R7T7S6	R7TJ67	Small ubiquitin-related modifier.	AlbA_2 domain-containing protein.	0.430
R7T7S6_CAPTE	R7TWX6_CAPTE	R7T7S6	R7TWX6	Small ubiquitin-related modifier.	Uncharacterized protein.	0.407
R7T7S6_CAPTE	R7UIW6_CAPTE	R7T7S6	R7UIW6	Small ubiquitin-related modifier.	Uncharacterized protein.	0.894
R7T7S6_CAPTE	R7UYG0_CAPTE	R7T7S6	R7UYG0	Small ubiquitin-related modifier.	RING-type domain-containing protein.	0.772
R7T7S6_CAPTE	R7V2A0_CAPTE	R7T7S6	R7V2A0	Small ubiquitin-related modifier.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.778
R7T7S6_CAPTE	R7V2Y5_CAPTE	R7T7S6	R7V2Y5	Small ubiquitin-related modifier.	Daxx domain-containing protein.	0.786
R7T7S6_CAPTE	R7V7S5_CAPTE	R7T7S6	R7V7S5	Small ubiquitin-related modifier.	Uncharacterized protein.	0.440
R7T7S6_CAPTE	R7V9S5_CAPTE	R7T7S6	R7V9S5	Small ubiquitin-related modifier.	Uncharacterized protein.	0.535
R7T7S6_CAPTE	R7VM53_CAPTE	R7T7S6	R7VM53	Small ubiquitin-related modifier.	Uncharacterized protein.	0.786
R7T8K0_CAPTE	R7UEQ1_CAPTE	R7T8K0	R7UEQ1	Uncharacterized protein.	Uncharacterized protein.	0.626
R7T8K0_CAPTE	R7US38_CAPTE	R7T8K0	R7US38	Uncharacterized protein.	Uncharacterized protein.	0.411
R7TEG0_CAPTE	R7TLV3_CAPTE	R7TEG0	R7TLV3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.595

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